Pairwise Alignments

Query, 328 a.a., Monosaccharide-transporting ATPase (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 340 a.a., ABC transporter, membrane spanning protein (ribose) from Agrobacterium fabrum C58

 Score =  178 bits (451), Expect = 2e-49
 Identities = 100/310 (32%), Positives = 169/310 (54%), Gaps = 19/310 (6%)

Query: 28  LLVAIGIFVANSFASPYFLNAWNLSDATFNFTEKAMIAFAMALLIISGEIDLSVASIIAL 87
           L   + +F A S A   F    N        T  A++      +II+G IDLSV S++AL
Sbjct: 30  LFALVAVFSATSNA---FFTVNNGMTIALQVTSIALLGIGATCVIITGGIDLSVGSVLAL 86

Query: 88  ASTAMGAAV-QMGVGTPGLVLIGLGVGLLCGAFNGVLVTRMGLPSIVVTIGTMSLFRGIS 146
           A      AV ++G+  P  +L+G+  G LCG  NG+LVTR  LP  + T+G M + RG++
Sbjct: 87  AGVVAALAVKELGMPVPIGMLLGILTGSLCGLINGLLVTRFKLPPFIATLGMMLIARGVA 146

Query: 147 YIVLGDQAFRGYPESFSWFGQGYVWWVIS---------------FELVLFAIIAVIYAML 191
             + G +A  G  ESF   G G ++ +++               + ++L  +IA+  + +
Sbjct: 147 LQITGARAVSGLGESFGELGNGALFRIVTIGDDGFPNVVFPGIPYPVILMVVIALAVSFM 206

Query: 192 LHKTNFGRAVYAIGNNATGAMFSGIRVQRVKFILFLLTGLMSGVAAICLTARLGSTRPSI 251
           L+++  GR +YA+G+NA  A  SG+ V RV    ++L+G ++G+    L +RL + +P+ 
Sbjct: 207 LNRSILGRHIYAVGSNADAARLSGVNVARVTNFTYILSGTLAGLTGCVLMSRLVTAQPNE 266

Query: 252 AMGWELEVVTMVVLGGVSILGGSGTILGVVIAAFVMGLVTFGLGLLNVPGIVMSIVIGAL 311
            + +EL+ +   V+GG S++GG GTI G  I AFV+G++  GL +  V      I+IG +
Sbjct: 267 GVMYELDAIASAVIGGTSLIGGVGTISGTAIGAFVIGILRNGLNMNGVSAFTQQIIIGLV 326

Query: 312 LIGVIALPRL 321
           ++  + + +L
Sbjct: 327 ILVTVWIDQL 336