Pairwise Alignments

Query, 470 a.a., UDP-N-acetylmuramate--alanine ligase (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 491 a.a., UDP-N-acetylmuramate:L-alanine ligase from Escherichia coli BL21

 Score =  364 bits (935), Expect = e-105
 Identities = 196/457 (42%), Positives = 271/457 (59%), Gaps = 14/457 (3%)

Query: 20  IHFTGIGGIGMSGIAEVLLTHGYTVQGSDLKPSKITERLERLGAKIFIGQVGENLADAEV 79
           IHF GIGG GM GIAEVL   GY + GSDL P+ +T++L  LGA I+     EN+ DA V
Sbjct: 22  IHFVGIGGAGMGGIAEVLANEGYQISGSDLAPNPVTQQLMNLGATIYFNHRPENVRDASV 81

Query: 80  VVISSAIKPGNPELETARARGLPVVRRAEMLAELMRLKSNIAIAGTHGKTTTTTMVATLL 139
           VV+SSAI   NPE+  A    +PV+RRAEMLAELMR +  IAIAGTHGKTTTT MV+++ 
Sbjct: 82  VVVSSAISADNPEIVAAHEARIPVIRRAEMLAELMRFRHGIAIAGTHGKTTTTAMVSSIY 141

Query: 140 DRGGIDPTVINGGIIHAYDSNARAGAGEWMVVEADESDGTFNRLPATIAVVTNIDPEHME 199
              G+DPT +NGG++ A   +AR G G +++ EADESD +F  L   +A+VTNI+ +HM+
Sbjct: 142 AEAGLDPTFVNGGLVKAAGVHARLGHGRYLIAEADESDASFLHLQPMVAIVTNIEADHMD 201

Query: 200 -HWGSFERLKDGFHEFVSNIPFYGLAVCCTDHPEVQALVGRITDRRVVTFGFNTQADVRA 258
            + G FE LK  F  F+ N+PFYG AV C D P ++ L+ R+  R+  T+GF+  ADVR 
Sbjct: 202 TYQGDFENLKQTFINFLHNLPFYGRAVMCVDDPVIRELLPRV-GRQTTTYGFSEDADVRV 260

Query: 259 VNLTYKSGVAHFDILLRNEGQVISGCTLPMPGDHNVSNALAAVAVARHLGMKRDEIRAAL 318
            +        HF +L +++  +    TL  PG HN  NA AAVAVA   G+  + I  AL
Sbjct: 261 EDYQQIGPQGHFTLLRQDKEPM--RVTLNAPGRHNALNAAAAVAVATEEGIDDEAILRAL 318

Query: 319 AGFAGVNRRFTKVAEL---------GGVTIIDDYGHHPVEIAAVLKAARQA-SEGRVIAV 368
             F G  RRF  + E          G   ++DDYGHHP E+ A +KAAR    +  ++ +
Sbjct: 319 ESFQGTGRRFDFLGEFPLEPVNGKSGTAMLVDDYGHHPTEVDATIKAARAGWPDKNLVML 378

Query: 369 HQPHRFSRLASLFEDFCTCFNEADVVGISDIFAAGEDPIPGASRDDLVKGLIAHGHRHAV 428
            QPHRF+R   L++DF     + D + + +++ AGE PIPGA    L + +   G    +
Sbjct: 379 FQPHRFTRTRDLYDDFANVLTQVDTLLMLEVYPAGEAPIPGADSRSLCRTIRGRGKIDPI 438

Query: 429 AVPDEDALEALIRAEAKPGDIVVCLGAGTISTWAHNL 465
            VPD   +  ++       D+++  GAG I   A +L
Sbjct: 439 LVPDPAQVAEMLAPVLTGNDLILVQGAGNIGKIARSL 475