Pairwise Alignments

Query, 558 a.a., Cytochrome c oxidase subunit I type (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 672 a.a., cytochrome bo terminal oxidase subunit I from Pseudomonas putida KT2440

 Score =  363 bits (933), Expect = e-105
 Identities = 209/551 (37%), Positives = 307/551 (55%), Gaps = 47/551 (8%)

Query: 18  FTRWFMSTNHKDIGILYILVAGLAGFISVAFTVYMRMELMNPGVQYMCTEGARFIAAGAN 77
           ++ W  + +HK IG++YI+VA +      A  + MR +L                A G +
Sbjct: 45  WSEWLTTVDHKKIGVMYIIVAMVMLLRGFADAIMMRTQLA--------------AATGGS 90

Query: 78  DVCTPNGHLWNVLITGHGILMMFFVVIPALFGGFGNYFMPLHIGAPDMAFPRLNNLSFWL 137
           +   P  H ++ + T HG++M+ F+ +P  F G  N  +PL IGA D+AFP LN+LSF+L
Sbjct: 91  EGYLPPEH-YDQIFTAHGVIMIIFMAMP-FFTGLMNLAVPLQIGARDVAFPFLNSLSFYL 148

Query: 138 YVAGTSLAIASVLAPGGNGQTGSGVGWVLYPPLSTTE--AGFSMDLAIFAVHVSGASSIL 195
            +AG  L   S+    G G+     GWV YPPL+  +   G  +D  I+A+ +SG  + L
Sbjct: 149 LLAGVLLVNISL----GVGEFAK-TGWVAYPPLAGIQYSPGVGVDYYIWALQLSGLGTTL 203

Query: 196 GAINIITTFLNMRAPGMTLFKVPLFAWSIFVTAWLILLALPVLAGAITMLLTDRNFGTTF 255
             +N + T + MRAPGM L  +P+F W+      LI+ + P+L  A+ +L  DR      
Sbjct: 204 TGVNFLVTVMKMRAPGMKLMDMPIFTWTCTWANVLIVASFPILTAALALLTVDRYLDFHI 263

Query: 256 FDPAGGGDPVLYQHILWFFGHPEVYIVILPAFGIISHVIATFSRKPVFGYMPMVWAMIAI 315
           F    GG+P++Y ++ W +GHPEVYI+ILPAFG+ S V +TFS K +FG+  M++A  AI
Sbjct: 264 FTNELGGNPMMYVNLFWAWGHPEVYILILPAFGVFSEVTSTFSGKRLFGHHSMIYASGAI 323

Query: 316 GGLGFVVWAHHMYTVGMSLTQQSYFMLATMVIAVPTGVKIFSWIATMWKGSLTFETPMLF 375
             LGF VW HH +T+G   +  ++F LATM+I++PTGVK+F+W+ TM++G + F  PML+
Sbjct: 324 AILGFAVWLHHFFTMGAGASVNTFFGLATMLISIPTGVKLFNWLFTMYQGRVRFTAPMLW 383

Query: 376 AIGFLFLFTVGGVTGIVLSQAGVDRAYHDTYYVVAHFHYVMSLGAVFGIFAGIYFWIGKM 435
            +GF+  F++GG+TG++L+  G D   H++ +V+AHFH V+  GAVFG  AG  FW  K 
Sbjct: 384 TLGFMVTFSIGGMTGVLLAVPGADFVLHNSLFVIAHFHNVIIGGAVFGYIAGFAFWFPKA 443

Query: 436 SGRQYPEWAGKVHFWTFFIGTNITFFPQHFLGRQGMPRR--YIDYPEAFGLWN---WVSS 490
            G    E  GK  FW +  G  + F P + LG  GM RR  + D P    LW    +V+ 
Sbjct: 444 FGFTLNEKWGKAAFWFWLSGFYVAFMPLYALGFMGMTRRLNHSDNP----LWEPYLYVAV 499

Query: 491 WGAFLSFASFLFFIGVVFYTITRGKRVEEENY------WNEHADTLEWTLPNPPPEHTFE 544
            GA L     LF I      I    R   +N       W     TLEW+  +PPP + F 
Sbjct: 500 VGAVL----ILFGIACQLIQIVVSVRDRNQNLDVTGDPWG--GRTLEWSTSSPPPFYNFA 553

Query: 545 QLPTR---DMW 552
            +P +   D W
Sbjct: 554 HMPEKVGLDCW 564