Pairwise Alignments

Query, 258 a.a., protein of unknown function DUF140 (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 265 a.a., ABC transporter permease from Pseudomonas simiae WCS417

 Score =  132 bits (333), Expect = 6e-36
 Identities = 82/269 (30%), Positives = 140/269 (52%), Gaps = 25/269 (9%)

Query: 1   MIRLIAAIGASVLGILGAAGRFAIF----------VGAAFSHMVRPPFYWREFGQALLNI 50
           +I  +   G S + I+   GR  IF          +G  F  +++           L ++
Sbjct: 6   LIEKVRLFGRSGIDIVEVLGRSTIFLFHALLGRGGIGGGFGLLIKQ----------LHSV 55

Query: 51  GYFSLPVVGLTAFFTGGALALQIYAGGARFSAEAVVPQIVAIGMVRELGPVLGGLMIAAR 110
           G  SL ++ ++  F G  LALQ +   + + +E  V Q+VA+ ++RELGPV+  L+ A R
Sbjct: 56  GVMSLVIIVVSGVFIGMVLALQGFNILSSYGSEQAVGQMVALTLLRELGPVVTALLFAGR 115

Query: 111 VTSSIAAEIATMKVTEQIDALVTLSTHPMKYLTAPRVLAAILVVPLLVAVGDTIGIMGGY 170
             S++ AEI  MK TEQ+ +L  +   P+KY+ APR+ A  + +PLL  +   +GI GG 
Sbjct: 116 AGSALTAEIGNMKSTEQLSSLEMIGVDPLKYIVAPRLWAGFISLPLLAMIFSVVGIWGGS 175

Query: 171 LVSTSRLGFNPATY---LQNTVDFLELHDIVSSLAKGAVFGAIAALMGCYSGMNSGRGAQ 227
            V+   LG    +Y   +QN+V F    D+++ + K  VF  +   +  + G +    ++
Sbjct: 176 WVAVDWLGVYDGSYWANMQNSVTF--SGDVLNGIIKSIVFAFVVTWIAVFQGYDCEPTSE 233

Query: 228 GVGAATKSSVVAAAVLILAANYMLTELFF 256
           G+  AT  +VV A++ +L  +++LT L F
Sbjct: 234 GISRATTKTVVYASLAVLGLDFILTALMF 262