Pairwise Alignments

Query, 258 a.a., protein of unknown function DUF140 (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 260 a.a., Uncharacterized ABC transporter, permease component YrbE from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  126 bits (317), Expect = 4e-34
 Identities = 77/262 (29%), Positives = 142/262 (54%), Gaps = 11/262 (4%)

Query: 1   MIRLIAAIGASVLGILGAAGRFAIFVGAAFSHMVRPPFYWRE---FGQALLNIGYFSLPV 57
           ++  +AA+G S +  +   GR  + +   F+ ++  P + +      + L N+G  S+ +
Sbjct: 2   LLNALAALGHSGIKTVRTFGRAGLML---FNAIIGKPEFRKHAPLLVRQLYNVGVLSMLI 58

Query: 58  VGLTAFFTGGALALQIYAGGARFSAEAVVPQIVAIGMVRELGPVLGGLMIAARVTSSIAA 117
           + ++  F G  L LQ Y     +SAE  +  +VA+ ++RELGPV+  L+ A R  S++ A
Sbjct: 59  IIVSGVFIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTA 118

Query: 118 EIATMKVTEQIDALVTLSTHPMKYLTAPRVLAAILVVPLLVAVGDTIGIMGGYLVSTSRL 177
           EI  M+ TEQ+ ++  ++  P++ + +PR  A ++ +PLL  +   +GI GG LV  S  
Sbjct: 119 EIGLMRATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTIIFVAVGIWGGSLVGVSWK 178

Query: 178 GFNPATY---LQNTVDFLELHDIVSSLAKGAVFGAIAALMGCYSGMNSGRGAQGVGAATK 234
           G +   +   +QN VD+    D+V+ L K  VF      +  ++G ++   + G+  AT 
Sbjct: 179 GIDAGFFWSAMQNAVDW--RMDLVNCLIKSVVFAITVTWIALFNGYDAIPTSAGISRATT 236

Query: 235 SSVVAAAVLILAANYMLTELFF 256
            +VV A++ +L  +++LT L F
Sbjct: 237 RTVVHASLAVLGLDFVLTALMF 258