Pairwise Alignments

Query, 725 a.a., excinuclease ABC, B subunit (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 671 a.a., excinuclease UvrABC protein B from Pseudomonas putida KT2440

 Score =  779 bits (2012), Expect = 0.0
 Identities = 392/662 (59%), Positives = 493/662 (74%), Gaps = 11/662 (1%)

Query: 25  FRMATSFEPAGDQPTAIAELSEGVRNGERDQVLLGATGTGKTFTMAKVIEQTQRPAIILA 84
           F++ T F+PAGDQP AI +L EG+  G   Q LLG TG+GKTF++A VI+Q QRP ++LA
Sbjct: 4   FQLVTRFQPAGDQPEAIRQLVEGIEAGLSHQTLLGVTGSGKTFSIANVIQQVQRPTLVLA 63

Query: 85  PNKTLAAQLYGEFKGFFPDNAVEYFVSYYDYYQPEAYVPRSDTYIEKESQINEQIDRMRH 144
           PNKTLAAQLYGEFK FFP+NAVEYFVSYYDYYQPEAYVP SDT+IEK++ IN+ I++MR 
Sbjct: 64  PNKTLAAQLYGEFKAFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIEQMRL 123

Query: 145 SATRALLERDDVIIVASVSCIYGIGSVETYEAMTQDLVAGQSYDQRQIMADLVAQQYRRN 204
           SAT+ALLER D IIV +VSCIYG+GS ETY  M   +  G   DQR ++  L   QY RN
Sbjct: 124 SATKALLERRDAIIVTTVSCIYGLGSPETYLKMVLHVDRGDKLDQRALLRRLADLQYTRN 183

Query: 205 DAGFQRGSFRVRGDSLEIWPAHMEDRALKFSFFGEELESITEFDPLTGEKADTLDRIRIY 264
           +  F R +FRVRGD ++I+PA  +  A++   F +E+E+I  FDPLTGE    L R   Y
Sbjct: 184 EMDFARATFRVRGDVIDIFPAESDLEAIRIELFDDEVENIAAFDPLTGEVFRKLPRFTFY 243

Query: 265 ANSHYVTPRPTLQQAIVSIKKELRIRLDQLVAEGKLLEAQRLEQRTNFDIEMLEATGVCN 324
             SHYVTPR TL +A+  IK+EL+ RL+ L    KL+EAQRLEQRT FD+EM+   G CN
Sbjct: 244 PKSHYVTPRETLLEAVEGIKEELKERLEYLHKANKLVEAQRLEQRTRFDLEMILELGYCN 303

Query: 325 GIENYSRYLTGRAPGEPPPTLFEYIPDNAIVFADESHVSVPQIGGMYKGDFRRKMTLAEH 384
           GIENYSRYL+GR  G PPPTL++Y+P +A++  DESHVSVPQ+G MYKGD  RK TL E+
Sbjct: 304 GIENYSRYLSGRPAGAPPPTLYDYLPPDALLVIDESHVSVPQVGAMYKGDRSRKETLVEY 363

Query: 385 GFRLPSCMDNRPLKFEEWDAMRPQSVFVSATPAAWELEQAGGVFTEQVIRPTGLLDPQVE 444
           GFR+PS +DNRP++F+EW+ + PQ++FVSATP  +E E AG V  EQV+RPTGL+DPQVE
Sbjct: 364 GFRMPSALDNRPMRFDEWEDVSPQTIFVSATPGPYEAEHAGRV-VEQVVRPTGLVDPQVE 422

Query: 445 IRPVEMQVDDLLDEVRRVTADGFRTLVTTLTKRMAEDLTEYMHEQGIKVRYMHSDIDTLE 504
           +RP   QVDDLL E+R+  A G R L TTLTKRMAEDL++Y+ +  ++VRY+HSDIDT+E
Sbjct: 423 VRPALTQVDDLLSEIRKRVAAGERVLATTLTKRMAEDLSDYLADHDVRVRYLHSDIDTVE 482

Query: 505 RIEILRDLRLGAFDVLIGINLLREGLDIPECGLVAILDADKEGFLRSETSLVQTIGRAAR 564
           R+EI+RDLRLG FDVL+GINLLREGLD+PE  LVAILDADKEGFLRSE SL+QTIGRAAR
Sbjct: 483 RVEIIRDLRLGTFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAAR 542

Query: 565 NAEGRVIMYADRITGSMERALAETNRRRAKQIAYNEEHGITPETVKKNVEDVMAGL---- 620
           N  GR I+YAD +TGSM+RA+ ET RRR KQIA+NE +GI P+ V K++ D+M G     
Sbjct: 543 NLNGRAILYADNVTGSMQRAIDETERRREKQIAFNEANGIVPKGVVKDITDIMEGATVPG 602

Query: 621 -----YQGDVDMNRVTAKVEKPLH-GGNLETVLEGLRADMRKAAENLEFEEAARLRDEVK 674
                 +G       +A+ E  L   G +   ++ L   M + A +LEFE AA+LRDE+ 
Sbjct: 603 ARSKKRKGMAKAAEESARYEAELRTPGEITKRIKQLEEKMMQFARDLEFEAAAQLRDEIA 662

Query: 675 RL 676
           +L
Sbjct: 663 QL 664