Pairwise Alignments

Query, 382 a.a., TRAP dicarboxylate transporter- DctP subunit (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 337 a.a., TRAP transporter substrate-binding protein from Serratia liquefaciens MT49

 Score = 71.2 bits (173), Expect = 4e-17
 Identities = 57/250 (22%), Positives = 102/250 (40%), Gaps = 3/250 (1%)

Query: 83  KENIQNATNGKVYVKLAPGGQLGAGAALVQAVQGATIQCAQHSLANFAPFASATDLINLP 142
           K+N++    GK+ +   P G LG  A  VQ V+   I       + +A       +++L 
Sbjct: 56  KQNLEQRLPGKIALNYFPNGMLGKEADAVQQVRIGAIDMMISGTSIWATLVPEIGVLDLG 115

Query: 143 YFCGSNQRFTNLVSSDPWKAEVHPKIEAAGFKALMYVVIDPRVVAVRAGGAGPVLSPGDL 202
           Y    NQ+    +     +       + +  K L Y      + A       P+ SP DL
Sbjct: 116 YLFNDNQQLGRALDGQAGQLLSAMLAKQSNIKVLGYGF---SLGARNIYSKKPLQSPQDL 172

Query: 203 DGIKFRVPGSAMLQQYYRMVGANPTPVAWGETPSAIKQGVADALDPSVGALYVFGFGDIL 262
           + +K RV  +       + +GA   P+  GE  SA++ GV D ++     +Y   + +I 
Sbjct: 173 NRMKVRVLPAPNFIATLKSMGATAIPMPGGEVYSALQMGVIDGVEHDAATVYTSKYYEIA 232

Query: 263 SHVTFTQAVPDSQVFSMNLEWFNSLPSDVQEGIEFAGEMTTHQNLAKVPSARAYAMSELT 322
            + T T+ + +  V +++   F  +P D+++ +  A    T             AM +L 
Sbjct: 233 KNATLTRHIYNPIVATISQAAFQRIPQDLRDEVLAAANEATLYERKIAAEKEIQAMEKLK 292

Query: 323 KSGVQFHSLD 332
            +GV F   D
Sbjct: 293 AAGVIFSETD 302