Pairwise Alignments

Query, 611 a.a., ABC transporter related (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 602 a.a., lipid A ABC exporter family, fused ATPase and inner membrane subunits (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  303 bits (776), Expect = 1e-86
 Identities = 201/593 (33%), Positives = 318/593 (53%), Gaps = 25/593 (4%)

Query: 22  LRRLAPFMRDERPLIAGGALAMLAAVFAKLAEPWPLKFVIDMFVPGRGGTEPGMPFGLTD 81
           L+ L P++   R L+    + ++   F  L  P  ++ V+D F   R        FG   
Sbjct: 26  LKTLFPYIAPYRTLLVSAGVVLVLTAFLSLLLPMAVRRVVDGF-DARDTALLDQYFGAA- 83

Query: 82  PIMLLVLCALSIVLVMGLRATFEFTARVTFALAGARVLAKVRATLFEHLQRLPVAFHQKS 141
                   A++ +L +G    +    R+     G RV+A +R ++F+    +  AF +K 
Sbjct: 84  -------IAVAALLALGTGLRYYLVTRL-----GERVVADIRKSVFDRTLGMSPAFFEKI 131

Query: 142 RPGDLTLRLISDVGMLKETTVTAALPLAV-NALVLVGMIAVMLWIDWQLALIALSPLPVL 200
             G++  RL +D  ++  + +++++ +A+ N L+L+G + +ML    +L  + L  +P++
Sbjct: 132 MTGEVLSRLTTDTTLIL-SVISSSVSIALRNFLILIGGMILMLLTSGKLTGLVLLLVPLV 190

Query: 201 WLMTMRIGRRIQSVSRKTRKTEGAMAASASEAMSNVAIVQALGLEKAMSKDFLGDNAAEL 260
            +  + +GR+++ +SR  +    A + +ASEA+++V  VQA    +    +F  D   EL
Sbjct: 191 LVPIVVLGRKLRKLSRINQDWIAASSGNASEALTSVQTVQAFTHVRESRAEF--DRMTEL 248

Query: 261 KQGVQSKRL--TAGLERRVDILVGVGIGLVLLFGGLSILDGRTTPGDLIVFLTYLKNTFK 318
                 +R+   A +   V  L+  GI  VL  G   + D   TPG+L+ F+ Y      
Sbjct: 249 SFDSAKQRIGVRAAMTVIVIFLIFTGIVGVLWMGARDVRDALMTPGELVQFVIYAIMVAG 308

Query: 319 PVRDYAKYAARLAKATAAGERVIALLDEDTKLTSLATPVKLPET-QGGIAFENVSLNLG- 376
            V   ++    L +A  A ER++ LL     +     P  +P   +G I FE+VS     
Sbjct: 309 SVGALSEIWGELQRAAGATERLVELLTMKDTVEDPENPRPMPANCEGRITFEDVSFTYPA 368

Query: 377 --GSEILKDISISIRAGERVAITGPSGSGKSTLLSLAMRLQDPDAGAVRLDGRDLRALAV 434
             G+ +L +I+  IR GE VA+ GPSG+GKST+L L +R  DPD G ++LDG DLR    
Sbjct: 369 RPGTPVLDEIAFDIRPGETVALVGPSGAGKSTILQLLLRFFDPDEGRIKLDGIDLRDARR 428

Query: 435 EDVRDSFAFVPQDPVLFHASIARNLGIAARHEPTPDEIIAAAQLAGAHDFILSQPQGYDT 494
           +D R   AFVPQD V+F  S   N+    R + T  E+ AAA+ A A +F+   P GY+T
Sbjct: 429 DDFRRKIAFVPQDAVIFATSARENIRFG-RPDATDAEVEAAAKAAAADEFLSRLPDGYET 487

Query: 495 VLAERGSTLSGGQRQRLSFTRAALRNAPIFLLDEPTTGLDATTQANLADAIWQLTENRTL 554
            + ERG  LSGGQ+QR++  RA LR+AP+ LLDE T+ LDA ++  +  A+ QL+E RT 
Sbjct: 488 FVGERGVMLSGGQKQRIAIARAILRDAPVLLLDEATSALDAESEQAVQHAVEQLSEGRTT 547

Query: 555 LMVTHDLHLAARADRVICLEGGRIVANGRHEDVLAQGGLYAKLWAEQMQTGVA 607
           L+V H L    +ADR++  E GRIVA G H+ ++AQGGLYA+L   Q   G+A
Sbjct: 548 LIVAHRLATVKKADRILVFERGRIVAEGTHDALVAQGGLYARLARLQFTAGLA 600