Pairwise Alignments

Query, 611 a.a., ABC transporter related (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 587 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  275 bits (702), Expect = 5e-78
 Identities = 160/529 (30%), Positives = 281/529 (53%), Gaps = 7/529 (1%)

Query: 81  DPIMLLVLCALSIVLVMGLRATFEFTARVTFALAGARVLAKVRATLFEHLQRLPVAFHQK 140
           D ++ +     +I +V GL     F      + AG  ++A+ +  +++ L +  V+F Q 
Sbjct: 64  DVVLEIAFAVAAIFIVKGLAT---FVQSYYLSKAGNSIVAEQQRKIYDRLLKQGVSFFQN 120

Query: 141 SRPGDLTLRLISDVGMLKETTVTAALPLAVNALVLVGMIAVMLWIDWQLALIALSPLPVL 200
               +L +R+  +    +    T       +   L+G+I VM   ++ L+ I++   PV 
Sbjct: 121 LPSSELLVRVTYNAQAARSVIDTIVTSFVRDLFSLLGLIIVMFAQNFLLSAISMIIGPVA 180

Query: 201 WLMTMRIGRRIQSVSRKTRKTEGAMAASASEAMSNVAIVQALGLEKAMSKDFLGDNAAEL 260
                 + RR++ +      + G +     E    V +++A  LEK M +  +    +++
Sbjct: 181 IFSVRLVLRRVRKIMEAELASLGEIVNVVQETSIGVRVIKAFSLEKLM-RQRMNKAVSDV 239

Query: 261 KQGVQS-KRLTAGLERRVDILVGVGIGLVLLFGGLSILDGRTTPGDLIVFLTYLKNTFKP 319
           +       +L A     ++ L G+ I +V+   G ++L+   +PGDL+ F+T L   ++P
Sbjct: 240 EHRANGIAKLEAATSPIMETLSGLAIAVVIAVSGYTVLEKGGSPGDLMAFITALLLAYEP 299

Query: 320 VRDYAKYAARLAKATAAGERVIALLDEDTKLTSLATPVKLPETQGGIAFENVSLN-LGGS 378
            +  A+   ++         +  +LD    L        LP+  G +  +NVS   +   
Sbjct: 300 AKRLARMRVQIEGGMIGVRMMFEVLDAPLTLAEKKDAQPLPKASGNVELKNVSFEYVANQ 359

Query: 379 EILKDISISIRAGERVAITGPSGSGKSTLLSLAMRLQDPDAGAVRLDGRDLRALAVEDVR 438
            +LKD+S+    G+  A+ GPSGSGKST+++L MRL DP +G+V ++G DLR ++   +R
Sbjct: 360 PVLKDVSVLFEGGKMTALVGPSGSGKSTIINLMMRLYDPQSGSVEINGMDLRDVSFASLR 419

Query: 439 DSFAFVPQDPVLFHASIARNLGIAARHEPTPDEIIAAAQLAGAHDFILSQPQGYDTVLAE 498
           +  ++V Q+  LF  ++  N+ +  R   T +EIIAAA+ A AHDFI++ P GYD+ L E
Sbjct: 420 EHVSYVGQETFLFSGTVKHNISVG-RDNATDEEIIAAAKAANAHDFIMNMPDGYDSKLGE 478

Query: 499 RGSTLSGGQRQRLSFTRAALRNAPIFLLDEPTTGLDATTQANLADAIWQLTENRTLLMVT 558
            GS LSGGQRQR++  RA LR+A I +LDE T+ LD+ ++A + DA+ +LT N+T +++ 
Sbjct: 479 NGSGLSGGQRQRVAIARAMLRDADILILDEATSALDSESEALVRDALERLTLNKTSIVIA 538

Query: 559 HDLHLAARADRVICLEGGRIVANGRHEDVLAQGGLYAKLWAEQMQTGVA 607
           H L    RAD+++ ++ G++V  G   ++LA  GLY +L + Q    VA
Sbjct: 539 HRLSTINRADKIVVMDNGQVVEQGSRRELLATDGLYKRLHSIQFDADVA 587