Pairwise Alignments

Query, 611 a.a., ABC transporter related (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 599 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  291 bits (746), Expect = 4e-83
 Identities = 197/592 (33%), Positives = 309/592 (52%), Gaps = 32/592 (5%)

Query: 25  LAPFMRDERPLIAGGALAMLAAVFAKLAEPWPLKFVIDMFVPGRGGTEPGMPFGLTDPIM 84
           L P++R  R L+A    A++ +    LA P  ++ +ID       G       G+ +   
Sbjct: 21  LFPYLRRYRGLMAAALFALVLSSATTLALPLAVRRIIDHGFQTPDG-------GMINSYF 73

Query: 85  LLVLCALSIVLVMGLRATFEFTARVTFALAGARVLAKVRATLFEHLQRLPVAFHQKSRPG 144
            ++L A+++VL +     + +   +     G RV+A +R  +F HL  L   F   +R G
Sbjct: 74  AMLL-AIAVVLALASAMRYYYVMTI-----GERVVADLRRDVFAHLTTLSQQFFDSNRSG 127

Query: 145 DLTLRLISDVGMLKETTVTAALPLAVNALVLVGMIAVMLWIDWQLALIALSPLPVLWLMT 204
           +LT RL +D   ++    ++A     N ++  G +A+M++    L+ +AL  +P +    
Sbjct: 128 ELTSRLTADTVQIRSAFGSSASVALRNIIMCCGAVAMMIYTSPGLSGLALLAIPFIVFPL 187

Query: 205 MRIGRRIQSVSRKTRKTEGAMAASASEAMSNVAIVQALGLEKAMSKDFLGDNAAELKQGV 264
           +  GR +++ SR T+ T    AA ASE ++    VQ+   E   +  +     A ++   
Sbjct: 188 IAFGRSVRARSRTTQDTLANSAAYASETIAASRTVQSFNAEVLANARY----GASVEAAY 243

Query: 265 QSKRLTAGLERRVDILVGVGIGLV-------LLFGGLSILDGRTTPGDLIVFLTYLKNTF 317
           Q  R   G      +L  V I LV       L +G  ++L G  T G L  F+ Y     
Sbjct: 244 QGARAAIGAR---SVLTAVAIALVFGSVVGILWYGAQNVLAGSMTAGTLGQFVLYSVIAA 300

Query: 318 KPVRDYAKYAARLAKATAAGERVIALLDEDTKLTSLATPVKLPETQGGIA-FENVSLNLG 376
             +   ++    LA+A  A ER+  LL+E + +   A PV +P+   G A F+NV     
Sbjct: 301 SGLGQLSEVWGELAQAGGAAERLSELLNERSPVAEPAAPVAMPQPPRGEAEFDNVDFVYP 360

Query: 377 ---GSEILKDISISIRAGERVAITGPSGSGKSTLLSLAMRLQDPDAGAVRLDGRDLRALA 433
              G  I+  +S+ + AGE VAI GPSG+GKST+ SL MR  DP  G + +DG D+R ++
Sbjct: 361 LATGRPIVSGLSLKVAAGETVAIVGPSGAGKSTVFSLLMRFYDPQQGRITIDGVDIRNVS 420

Query: 434 VEDVRDSFAFVPQDPVLFHASIARNLGIAARHEPTPDEIIAAAQLAGAHDFILSQPQGYD 493
           + D+R   + VPQD  +F +SI  N+    R E T +++ AAA  A A  FI     GYD
Sbjct: 421 LADLRARLSIVPQDVAIFASSIHDNIAFG-RPEATREDVRAAAIAAQADGFIERLGDGYD 479

Query: 494 TVLAERGSTLSGGQRQRLSFTRAALRNAPIFLLDEPTTGLDATTQANLADAIWQLTENRT 553
           T + ERG TLSGGQRQR++  RA LR+API LLDE T+ LDA ++  +  A+ +L + RT
Sbjct: 480 TQVGERGVTLSGGQRQRIAIARAILRDAPILLLDEATSALDAESETLVQKALDELMKTRT 539

Query: 554 LLMVTHDLHLAARADRVICLEGGRIVANGRHEDVLAQGGLYAKLWAEQMQTG 605
            +++ H L    +ADR++ ++ GRI+  G H+ ++ Q GLYA+L   Q QTG
Sbjct: 540 TIVIAHRLATVLKADRILVMDEGRIIEEGTHQSLIRQNGLYARLARLQFQTG 591