Pairwise Alignments

Query, 273 a.a., Integrase catalytic region (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 274 a.a., IS426 transposase from Agrobacterium fabrum C58

 Score = 88.2 bits (217), Expect = 2e-22
 Identities = 65/237 (27%), Positives = 108/237 (45%), Gaps = 15/237 (6%)

Query: 35  DTELRVRMKELASERRRFGYRRLHMLLKREGWE-----VNWKKLYRLYRDEGLTVRKRGG 89
           D EL   ++ L  +R  +GYRR+  LL RE        VN K+++R+  +  + +     
Sbjct: 34  DAELLPAIRRLVDQRPTYGYRRIAALLNRERRAADQPVVNAKRVHRIMGNHAMLLEHTAV 93

Query: 90  RKRAVGTRTPMAIPQGPNQRWSLDFMSDALEDGRRFRVLNVIDDFSRECLA--AVVDTSI 147
           RK  +     M +    N RW  D +  A  +G   R+  +ID F RE +A  AV +  I
Sbjct: 94  RKGRLHDGKVMVMRS--NLRWCSDGLEFACWNGEVIRLAFIIDAFDREIIAWTAVANAGI 151

Query: 148 SGARVARELDRIAELRGYPCLV------VSDNGTELTSNAMLKWQEDRKVDWHYIAPGKP 201
           SG+ V   +    E R +          +SDNG+  T+     + +   +   +     P
Sbjct: 152 SGSDVRDMMLEAVEKRFHATRAPHAIEHLSDNGSAYTARDTRLFAQALNLTPCFTPVASP 211

Query: 202 MQNGLVESFNGRMREECLNEHLFPSLRHACRMIAAWRDDYNHHRPHSSLDGLTPREY 258
             NG+ E+F   ++ + +     P  + A R+I  W +DYN   PHS+L   +PR++
Sbjct: 212 QSNGMSEAFVKTLKRDYIRISALPDAQTALRLIDGWIEDYNEIHPHSALKMASPRQF 268