Pairwise Alignments

Query, 103 a.a., pentapeptide repeat protein (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 511 a.a., hypothetical protein from Magnetospirillum magneticum AMB-1

 Score = 58.5 bits (140), Expect = 9e-14
 Identities = 37/100 (37%), Positives = 52/100 (52%), Gaps = 10/100 (10%)

Query: 3   DGVDFSHANMVRVDA----------HDAKLNRARLIGANLRGANLTGAELVGADFTGSNL 52
           DG DF +A +   +             AKLN + L GA LRG +L+GA L GA   G++ 
Sbjct: 400 DGSDFRYATLSAANLGGANLGVAAMRHAKLNLSNLEGAVLRGTDLSGASLGGARTAGADF 459

Query: 53  ENAILHGADISGANFTKTTGLTHEMLGAAIGSQDTILPEG 92
           + AI+ GAD+  A+ +K   LT   +  AI  + T LP G
Sbjct: 460 KGAIMMGADLRDADLSKAENLTQAQVDKAICDKATRLPPG 499



 Score = 44.7 bits (104), Expect = 1e-09
 Identities = 36/98 (36%), Positives = 47/98 (47%), Gaps = 15/98 (15%)

Query: 4   GVDFSHANMVRVDAHDAKLNRARLIG----------ANLRGANLTGAELVGADFTGSNLE 53
           G   ++A    VD  D+ L  ARL G          ANL GANL  A +  A    SNLE
Sbjct: 376 GAILANATFREVDLSDSCLAEARLDGSDFRYATLSAANLGGANLGVAAMRHAKLNLSNLE 435

Query: 54  NAILHGADISGANF--TKTTGLTHE---MLGAAIGSQD 86
            A+L G D+SGA+    +T G   +   M+GA +   D
Sbjct: 436 GAVLRGTDLSGASLGGARTAGADFKGAIMMGADLRDAD 473



 Score = 35.8 bits (81), Expect = 7e-07
 Identities = 22/69 (31%), Positives = 36/69 (52%)

Query: 15  VDAHDAKLNRARLIGANLRGANLTGAELVGADFTGSNLENAILHGADISGANFTKTTGLT 74
           +  + A+  RA   G +L GA+L+GA L  A F   +L ++ L  A + G++F   T   
Sbjct: 352 LQTNGAEGKRATFTGMDLAGADLSGAILANATFREVDLSDSCLAEARLDGSDFRYATLSA 411

Query: 75  HEMLGAAIG 83
             + GA +G
Sbjct: 412 ANLGGANLG 420



 Score = 32.0 bits (71), Expect = 9e-06
 Identities = 20/64 (31%), Positives = 30/64 (46%)

Query: 3   DGVDFSHANMVRVDAHDAKLNRARLIGANLRGANLTGAELVGADFTGSNLENAILHGADI 62
           +G +   A    +D   A L+ A L  A  R  +L+ + L  A   GS+   A L  A++
Sbjct: 355 NGAEGKRATFTGMDLAGADLSGAILANATFREVDLSDSCLAEARLDGSDFRYATLSAANL 414

Query: 63  SGAN 66
            GAN
Sbjct: 415 GGAN 418



 Score = 26.6 bits (57), Expect = 4e-04
 Identities = 16/48 (33%), Positives = 25/48 (52%)

Query: 20  AKLNRARLIGANLRGANLTGAELVGADFTGSNLENAILHGADISGANF 67
           A L+ + ++  + +     GAE   A FTG +L  A L GA ++ A F
Sbjct: 337 AALDVSAVVAEHGKWLQTNGAEGKRATFTGMDLAGADLSGAILANATF 384