Pairwise Alignments

Query, 103 a.a., pentapeptide repeat protein (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 177 a.a., pentapeptide repeat-containing protein from Magnetospirillum magneticum AMB-1

 Score = 55.1 bits (131), Expect = 4e-13
 Identities = 32/75 (42%), Positives = 43/75 (57%), Gaps = 10/75 (13%)

Query: 4   GVDFSHANMVRVDAHDAKLNRARLIGANLRGANLTGAEL----------VGADFTGSNLE 53
           G     AN+ + +   A+L  A L  A L GANL+GA+L          +GA+FTG+NL 
Sbjct: 89  GSSLQVANLTKANLSKARLVHAHLHAAQLMGANLSGADLSDAIMTKTFAMGANFTGANLS 148

Query: 54  NAILHGADISGANFT 68
           +A L GAD SGA +T
Sbjct: 149 HASLQGADFSGATWT 163



 Score = 54.3 bits (129), Expect = 6e-13
 Identities = 30/68 (44%), Positives = 41/68 (60%), Gaps = 5/68 (7%)

Query: 6   DFSHANMVRVDAHDAKLNRARLIGANLRGANLTGAELVGADFTGSNLE-----NAILHGA 60
           +  +AN+V  D HD   + AR+ GANL GANLTG+ L  A+ T +NL      +A LH A
Sbjct: 56  ELRNANLVGKDLHDGNYDTARMDGANLSGANLTGSSLQVANLTKANLSKARLVHAHLHAA 115

Query: 61  DISGANFT 68
            + GAN +
Sbjct: 116 QLMGANLS 123



 Score = 37.7 bits (86), Expect = 6e-08
 Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 1/61 (1%)

Query: 21  KLNRARLIGANLRGANLTGAELVGADFTGSNLENAILHGADISGANFTKTTGLTHEMLGA 80
           +L  A L+G +L   N   A + GA+ +G+NL  + L  A+++ AN +K   L H  L A
Sbjct: 56  ELRNANLVGKDLHDGNYDTARMDGANLSGANLTGSSLQVANLTKANLSKAR-LVHAHLHA 114

Query: 81  A 81
           A
Sbjct: 115 A 115



 Score = 28.1 bits (61), Expect = 5e-05
 Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 5/48 (10%)

Query: 10  ANMVRVDAHDAKLNR-----ARLIGANLRGANLTGAELVGADFTGSNL 52
           AN+   D  DA + +     A   GANL  A+L GA+  GA +T  ++
Sbjct: 120 ANLSGADLSDAIMTKTFAMGANFTGANLSHASLQGADFSGATWTDGHV 167