Pairwise Alignments

Query, 103 a.a., pentapeptide repeat protein (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 542 a.a., hypothetical protein from Magnetospirillum magneticum AMB-1

 Score = 53.1 bits (126), Expect = 4e-12
 Identities = 31/64 (48%), Positives = 40/64 (62%), Gaps = 1/64 (1%)

Query: 6   DFSHANMVRVDAHDAKL-NRARLIGANLRGANLTGAELVGADFTGSNLENAILHGADISG 64
           +FS ANM   +   A L  +  L G +L GANL GA+L+GA+F+G+ L  A L GAD   
Sbjct: 100 NFSGANMRMANLAGANLAGKMDLSGVDLTGANLAGAKLMGANFSGATLAGANLAGADARN 159

Query: 65  ANFT 68
           ANFT
Sbjct: 160 ANFT 163



 Score = 51.2 bits (121), Expect = 2e-11
 Identities = 28/69 (40%), Positives = 37/69 (53%)

Query: 4   GVDFSHANMVRVDAHDAKLNRARLIGANLRGANLTGAELVGADFTGSNLENAILHGADIS 63
           GVD + AN+       A  + A L GANL GA+   A   GAD T +    A+L GA++S
Sbjct: 124 GVDLTGANLAGAKLMGANFSGATLAGANLAGADARNANFTGADLTDAVTAGALLDGANMS 183

Query: 64  GANFTKTTG 72
           GA   +T G
Sbjct: 184 GAVIRRTAG 192



 Score = 49.3 bits (116), Expect = 6e-11
 Identities = 32/79 (40%), Positives = 41/79 (51%), Gaps = 1/79 (1%)

Query: 3   DGVDFSHANMVRVDAHDAKLNRARLIGANLRGANLTGAELVG-ADFTGSNLENAILHGAD 61
           +  D S A +   +   A L RA   GAN+R ANL GA L G  D +G +L  A L GA 
Sbjct: 77  EDADLSGAKLQGANLAGATLLRANFSGANMRMANLAGANLAGKMDLSGVDLTGANLAGAK 136

Query: 62  ISGANFTKTTGLTHEMLGA 80
           + GANF+  T     + GA
Sbjct: 137 LMGANFSGATLAGANLAGA 155



 Score = 46.2 bits (108), Expect = 5e-10
 Identities = 30/74 (40%), Positives = 41/74 (55%)

Query: 8   SHANMVRVDAHDAKLNRARLIGANLRGANLTGAELVGADFTGSNLENAILHGADISGANF 67
           S AN+   +   A L  A L GA L+GANL GA L+ A+F+G+N+  A L GA+++G   
Sbjct: 62  SGANLRDCNLPRACLEDADLSGAKLQGANLAGATLLRANFSGANMRMANLAGANLAGKMD 121

Query: 68  TKTTGLTHEMLGAA 81
                LT   L  A
Sbjct: 122 LSGVDLTGANLAGA 135



 Score = 45.8 bits (107), Expect = 7e-10
 Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 1/78 (1%)

Query: 4   GVDFSHANMVRVDAHDAKLNRARLIGANLRGA-NLTGAELVGADFTGSNLENAILHGADI 62
           G + + A ++R +   A +  A L GANL G  +L+G +L GA+  G+ L  A   GA +
Sbjct: 88  GANLAGATLLRANFSGANMRMANLAGANLAGKMDLSGVDLTGANLAGAKLMGANFSGATL 147

Query: 63  SGANFTKTTGLTHEMLGA 80
           +GAN            GA
Sbjct: 148 AGANLAGADARNANFTGA 165



 Score = 43.9 bits (102), Expect = 3e-09
 Identities = 22/52 (42%), Positives = 30/52 (57%)

Query: 14  RVDAHDAKLNRARLIGANLRGANLTGAELVGADFTGSNLENAILHGADISGA 65
           ++D     L  A L GA L GAN +GA L GA+  G++  NA   GAD++ A
Sbjct: 119 KMDLSGVDLTGANLAGAKLMGANFSGATLAGANLAGADARNANFTGADLTDA 170



 Score = 42.4 bits (98), Expect = 7e-09
 Identities = 26/66 (39%), Positives = 35/66 (53%)

Query: 20  AKLNRARLIGANLRGANLTGAELVGADFTGSNLENAILHGADISGANFTKTTGLTHEMLG 79
           A L +A L GANLR  NL  A L  AD +G+ L+ A L GA +  ANF+        + G
Sbjct: 54  ANLRKAVLSGANLRDCNLPRACLEDADLSGAKLQGANLAGATLLRANFSGANMRMANLAG 113

Query: 80  AAIGSQ 85
           A +  +
Sbjct: 114 ANLAGK 119



 Score = 40.8 bits (94), Expect = 2e-08
 Identities = 22/59 (37%), Positives = 33/59 (55%)

Query: 24 RARLIGANLRGANLTGAELVGADFTGSNLENAILHGADISGANFTKTTGLTHEMLGAAI 82
          R  L  ANLRGANL G +L G+  + +NL  A+L GA++   N  +      ++ GA +
Sbjct: 28 RPDLTNANLRGANLAGMDLSGSLLSLANLRKAVLSGANLRDCNLPRACLEDADLSGAKL 86



 Score = 38.5 bits (88), Expect = 1e-07
 Identities = 27/75 (36%), Positives = 38/75 (50%)

Query: 6   DFSHANMVRVDAHDAKLNRARLIGANLRGANLTGAELVGADFTGSNLENAILHGADISGA 65
           D ++AN+   +     L+ + L  ANLR A L+GA L   +   + LE+A L GA + GA
Sbjct: 30  DLTNANLRGANLAGMDLSGSLLSLANLRKAVLSGANLRDCNLPRACLEDADLSGAKLQGA 89

Query: 66  NFTKTTGLTHEMLGA 80
           N    T L     GA
Sbjct: 90  NLAGATLLRANFSGA 104



 Score = 23.9 bits (50), Expect = 0.003
 Identities = 11/23 (47%), Positives = 14/23 (60%)

Query: 43 VGADFTGSNLENAILHGADISGA 65
          V  D T +NL  A L G D+SG+
Sbjct: 27 VRPDLTNANLRGANLAGMDLSGS 49