Pairwise Alignments

Query, 103 a.a., pentapeptide repeat protein (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 291 a.a., FIG01046201: hypothetical protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 46.2 bits (108), Expect = 3e-10
 Identities = 34/90 (37%), Positives = 49/90 (54%), Gaps = 7/90 (7%)

Query: 8   SHANMVRVDAHDAKLNRARLIGANLRGANLTGAELVGADFTGSNLENAILHGAD-----I 62
           S+ N+V  +   A L+   L+G+N+  ANLT A+L  A+ +G NL  AIL G+D     +
Sbjct: 187 SNVNLVGANLCCANLHAVNLMGSNMTKANLTHADLTCANMSGVNLTAAILFGSDLTDTKL 246

Query: 63  SGANFTK-TTGLTHEMLGAAI-GSQDTILP 90
           +GA   K    L   + GA + GSQ T  P
Sbjct: 247 NGAKLDKIALTLAKALTGADLTGSQHTPTP 276



 Score = 45.8 bits (107), Expect = 4e-10
 Identities = 25/65 (38%), Positives = 36/65 (55%)

Query: 4   GVDFSHANMVRVDAHDAKLNRARLIGANLRGANLTGAELVGADFTGSNLENAILHGADIS 63
           G D S  +    D  +  L+   L+GANL  ANL    L+G++ T +NL +A L  A++S
Sbjct: 168 GEDLSKIDASNADFRETTLSNVNLVGANLCCANLHAVNLMGSNMTKANLTHADLTCANMS 227

Query: 64  GANFT 68
           G N T
Sbjct: 228 GVNLT 232



 Score = 41.6 bits (96), Expect = 7e-09
 Identities = 23/63 (36%), Positives = 33/63 (52%)

Query: 6   DFSHANMVRVDAHDAKLNRARLIGANLRGANLTGAELVGADFTGSNLENAILHGADISGA 65
           DF   ++ ++DA +A      L   NL GANL  A L   +  GSN+  A L  AD++ A
Sbjct: 165 DFQGEDLSKIDASNADFRETTLSNVNLVGANLCCANLHAVNLMGSNMTKANLTHADLTCA 224

Query: 66  NFT 68
           N +
Sbjct: 225 NMS 227



 Score = 35.4 bits (80), Expect = 5e-07
 Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 6/72 (8%)

Query: 5   VDFSHANMVRVDAHDAKLNRARLIGANLRGANLTGAELVGADFTGSNLEN------AILH 58
           V+   +NM + +   A L  A + G NL  A L G++L      G+ L+         L 
Sbjct: 204 VNLMGSNMTKANLTHADLTCANMSGVNLTAAILFGSDLTDTKLNGAKLDKIALTLAKALT 263

Query: 59  GADISGANFTKT 70
           GAD++G+  T T
Sbjct: 264 GADLTGSQHTPT 275



 Score = 32.0 bits (71), Expect = 6e-06
 Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 6/71 (8%)

Query: 11  NMVRVDAHDAKLNRARLIGANLRGANLTGAELVGADFTGSNLENAILHGADISGANFTKT 70
           N+   D     L++     A+ R   L+   LVGA+   +N     LH  ++ G+N TK 
Sbjct: 160 NLAHKDFQGEDLSKIDASNADFRETTLSNVNLVGANLCCAN-----LHAVNLMGSNMTK- 213

Query: 71  TGLTHEMLGAA 81
             LTH  L  A
Sbjct: 214 ANLTHADLTCA 224