Pairwise Alignments

Query, 103 a.a., pentapeptide repeat protein (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 245 a.a., pentapeptide repeat protein (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 49.3 bits (116), Expect = 3e-11
 Identities = 27/65 (41%), Positives = 36/65 (55%)

Query: 6   DFSHANMVRVDAHDAKLNRARLIGANLRGANLTGAELVGADFTGSNLENAILHGADISGA 65
           D   A++       A    ARL+GA LR A+LTGA L GAD + ++L  A+   A  SGA
Sbjct: 168 DLGGADLSGAFLEGANFGNARLVGAVLREADLTGARLTGADLSEADLTGAVTQAAGFSGA 227

Query: 66  NFTKT 70
            F +T
Sbjct: 228 VFCRT 232



 Score = 46.6 bits (109), Expect = 2e-10
 Identities = 34/97 (35%), Positives = 49/97 (50%), Gaps = 13/97 (13%)

Query: 4   GVDFSHANMVRVDAHDAKLNRARLIGANLRGANLTGAELVGADFTGSNLENAILHGADIS 63
           G D   A+MV V      L RA L  A+L GA+L+GA L GA+F  + L  A+L  AD++
Sbjct: 146 GADLRAASMVGV-----ALPRATLTEADLGGADLSGAFLEGANFGNARLVGAVLREADLT 200

Query: 64  GANFTKTTGLTHEMLGAAIGSQD--------TILPEG 92
           GA  T       ++ GA   +          T++P+G
Sbjct: 201 GARLTGADLSEADLTGAVTQAAGFSGAVFCRTVMPDG 237



 Score = 45.4 bits (106), Expect = 4e-10
 Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 1/89 (1%)

Query: 4   GVDFSHANMVRVDAHDAKLNRARLIGANLRGANLTGAELVGADFTGSNLENAILHGADIS 63
           GV    A +   D   A L+ A L GAN   A L GA L  AD TG+ L  A L  AD++
Sbjct: 156 GVALPRATLTEADLGGADLSGAFLEGANFGNARLVGAVLREADLTGARLTGADLSEADLT 215

Query: 64  GANFTKTTGLTHEMLGAAIGSQDTILPEG 92
           GA  T+  G +  +    +    T+  +G
Sbjct: 216 GA-VTQAAGFSGAVFCRTVMPDGTLRSDG 243



 Score = 38.5 bits (88), Expect = 5e-08
 Identities = 26/66 (39%), Positives = 33/66 (50%), Gaps = 2/66 (3%)

Query: 2   ADGVDFSHANMVRVD--AHDAKLNRARLIGANLRGANLTGAELVGADFTGSNLENAILHG 59
           A G D    N +  D    D  L  A L GA+LR A LT A   GA+  G++L +A +  
Sbjct: 62  ATGADRDSVNALLADNQCRDCDLAGAELAGADLRDAYLTYAVFDGANLEGADLRDAFMPF 121

Query: 60  ADISGA 65
           A  SGA
Sbjct: 122 AQFSGA 127



 Score = 38.1 bits (87), Expect = 7e-08
 Identities = 20/48 (41%), Positives = 29/48 (60%)

Query: 3   DGVDFSHANMVRVDAHDAKLNRARLIGANLRGANLTGAELVGADFTGS 50
           +G +F +A +V     +A L  ARL GA+L  A+LTGA    A F+G+
Sbjct: 180 EGANFGNARLVGAVLREADLTGARLTGADLSEADLTGAVTQAAGFSGA 227



 Score = 35.8 bits (81), Expect = 3e-07
 Identities = 26/91 (28%), Positives = 38/91 (41%), Gaps = 10/91 (10%)

Query: 6   DFSHANMVRVDAHDAKLNRARLIGANLRGANL----------TGAELVGADFTGSNLENA 55
           D + A +   D  DA L  A   GANL GA+L          +GA + G  F  +N  + 
Sbjct: 83  DLAGAELAGADLRDAYLTYAVFDGANLEGADLRDAFMPFAQFSGARMRGILFDRTNARDT 142

Query: 56  ILHGADISGANFTKTTGLTHEMLGAAIGSQD 86
           +  GAD+  A+          +  A +G  D
Sbjct: 143 VFAGADLRAASMVGVALPRATLTEADLGGAD 173



 Score = 32.7 bits (73), Expect = 3e-06
 Identities = 17/42 (40%), Positives = 23/42 (54%)

Query: 25  ARLIGANLRGANLTGAELVGADFTGSNLENAILHGADISGAN 66
           A L     R  +L GAEL GAD   + L  A+  GA++ GA+
Sbjct: 72  ALLADNQCRDCDLAGAELAGADLRDAYLTYAVFDGANLEGAD 113



 Score = 32.3 bits (72), Expect = 4e-06
 Identities = 23/72 (31%), Positives = 31/72 (43%), Gaps = 10/72 (13%)

Query: 7   FSHANMVRVDAHDAKLNRARLIGANLRG----------ANLTGAELVGADFTGSNLENAI 56
           F  AN+   D  DA +  A+  GA +RG              GA+L  A   G  L  A 
Sbjct: 104 FDGANLEGADLRDAFMPFAQFSGARMRGILFDRTNARDTVFAGADLRAASMVGVALPRAT 163

Query: 57  LHGADISGANFT 68
           L  AD+ GA+ +
Sbjct: 164 LTEADLGGADLS 175



 Score = 24.3 bits (51), Expect = 0.001
 Identities = 13/39 (33%), Positives = 19/39 (48%)

Query: 28  IGANLRGANLTGAELVGADFTGSNLENAILHGADISGAN 66
           + A L        +L GA+  G++L +A L  A   GAN
Sbjct: 70  VNALLADNQCRDCDLAGAELAGADLRDAYLTYAVFDGAN 108