Pairwise Alignments
Query, 103 a.a., pentapeptide repeat protein (RefSeq) from Dinoroseobacter shibae DFL-12
Subject, 422 a.a., pentapeptide repeat-containing protein from Brevundimonas sp. GW460-12-10-14-LB2
Score = 50.1 bits (118), Expect = 3e-11
Identities = 35/91 (38%), Positives = 46/91 (50%), Gaps = 15/91 (16%)
Query: 3 DGVDFSHANMVRVDAHDAKLNRARLIGANLRGANLTGAE---------LVGAD-FTGSNL 52
+GV A + D AKL RA L GA LRGA L GA+ L+ AD ++L
Sbjct: 306 EGVQLQGAQLDNADLRSAKLRRADLRGARLRGARLNGADMREAQLGPLLIAADRLMPADL 365
Query: 53 ENAILHGADISGANFTKTTGLTHEMLGAAIG 83
AIL GAD+SGA+ + + GA +G
Sbjct: 366 TGAILRGADLSGADLRRAV-----LAGADLG 391
Score = 49.7 bits (117), Expect = 4e-11
Identities = 36/100 (36%), Positives = 47/100 (47%), Gaps = 19/100 (19%)
Query: 3 DGVDFSHANMVRVDAHDAKLNRARLIGANLRGA---------------NLTGAELVGADF 47
D D A + R D A+L ARL GA++R A +LTGA L GAD
Sbjct: 316 DNADLRSAKLRRADLRGARLRGARLNGADMREAQLGPLLIAADRLMPADLTGAILRGADL 375
Query: 48 TGSNLENAILHGADISGANF----TKTTGLTHEMLGAAIG 83
+G++L A+L GAD+ A T+ T LT L G
Sbjct: 376 SGADLRRAVLAGADLGRATLHGAQTRQTDLTDANLAGVRG 415
Score = 46.6 bits (109), Expect = 3e-10
Identities = 32/70 (45%), Positives = 40/70 (57%), Gaps = 15/70 (21%)
Query: 6 DFSHANMVRVDAHDAKLNRARLIGANLRGANLTGAELVGADFTGSNLENAIL-------- 57
DFS A M D KL RA L A+ RGA+L GA+L GAD +G++L +AIL
Sbjct: 171 DFSGAVM-----KDCKLVRANLKQADFRGADLAGADLSGADLSGADLRDAILVGCKTTMW 225
Query: 58 --HGADISGA 65
GAD+ GA
Sbjct: 226 RADGADMQGA 235
Score = 42.0 bits (97), Expect = 8e-09
Identities = 24/68 (35%), Positives = 36/68 (52%)
Query: 13 VRVDAHDAKLNRARLIGANLRGANLTGAELVGADFTGSNLENAILHGADISGANFTKTTG 72
V+ D A + +L+ ANL+ A+ GA+L GAD +G++L A L A + G T
Sbjct: 168 VKADFSGAVMKDCKLVRANLKQADFRGADLAGADLSGADLSGADLRDAILVGCKTTMWRA 227
Query: 73 LTHEMLGA 80
+M GA
Sbjct: 228 DGADMQGA 235
Score = 39.7 bits (91), Expect = 4e-08
Identities = 23/58 (39%), Positives = 30/58 (51%)
Query: 4 GVDFSHANMVRVDAHDAKLNRARLIGANLRGANLTGAELVGADFTGSNLENAILHGAD 61
G +AN D DA L A L ++LRGA L GA+L GAD ++L + AD
Sbjct: 72 GAKLDNANFFGADMQDAILAEASLRRSDLRGACLRGADLSGADLFEADLREGTIAAAD 129
Score = 38.5 bits (88), Expect = 8e-08
Identities = 24/66 (36%), Positives = 35/66 (53%)
Query: 6 DFSHANMVRVDAHDAKLNRARLIGANLRGANLTGAELVGADFTGSNLENAILHGADISGA 65
DF+ A + D AKL+ A GA+++ A L A L +D G+ L A L GAD+ A
Sbjct: 59 DFAAACLEGCDLTGAKLDNANFFGADMQDAILAEASLRRSDLRGACLRGADLSGADLFEA 118
Query: 66 NFTKTT 71
+ + T
Sbjct: 119 DLREGT 124
Score = 38.5 bits (88), Expect = 8e-08
Identities = 24/65 (36%), Positives = 33/65 (50%)
Query: 2 ADGVDFSHANMVRVDAHDAKLNRARLIGANLRGANLTGAELVGADFTGSNLENAILHGAD 61
A G + AN+ R +A GA ++ L A L ADF G++L A L GAD
Sbjct: 147 ASGACLAGANLQRSKMAGVIAVKADFSGAVMKDCKLVRANLKQADFRGADLAGADLSGAD 206
Query: 62 ISGAN 66
+SGA+
Sbjct: 207 LSGAD 211
Score = 37.7 bits (86), Expect = 1e-07
Identities = 22/65 (33%), Positives = 32/65 (49%)
Query: 22 LNRARLIGANLRGANLTGAELVGADFTGSNLENAILHGADISGANFTKTTGLTHEMLGAA 81
L+ L G NL A+ A L G D TG+ L+NA GAD+ A + + ++ GA
Sbjct: 45 LSGLSLKGRNLADADFAAACLEGCDLTGAKLDNANFFGADMQDAILAEASLRRSDLRGAC 104
Query: 82 IGSQD 86
+ D
Sbjct: 105 LRGAD 109
Score = 37.0 bits (84), Expect = 2e-07
Identities = 23/55 (41%), Positives = 28/55 (50%)
Query: 20 AKLNRARLIGANLRGANLTGAELVGADFTGSNLENAILHGADISGANFTKTTGLT 74
A L A L GA+L GA+L A L GAD + L A D++ AN GLT
Sbjct: 363 ADLTGAILRGADLSGADLRRAVLAGADLGRATLHGAQTRQTDLTDANLAGVRGLT 417
Score = 36.2 bits (82), Expect = 4e-07
Identities = 25/68 (36%), Positives = 31/68 (45%), Gaps = 5/68 (7%)
Query: 4 GVDFSHANMVRVDAHDAKLNRARLIGANLRGANLTGAE-----LVGADFTGSNLENAILH 58
G+ N+ D A L L GA L AN GA+ L A S+L A L
Sbjct: 47 GLSLKGRNLADADFAAACLEGCDLTGAKLDNANFFGADMQDAILAEASLRRSDLRGACLR 106
Query: 59 GADISGAN 66
GAD+SGA+
Sbjct: 107 GADLSGAD 114
Score = 35.0 bits (79), Expect = 9e-07
Identities = 20/44 (45%), Positives = 27/44 (61%)
Query: 3 DGVDFSHANMVRVDAHDAKLNRARLIGANLRGANLTGAELVGAD 46
D +F A+M +A L R+ L GA LRGA+L+GA+L AD
Sbjct: 76 DNANFFGADMQDAILAEASLRRSDLRGACLRGADLSGADLFEAD 119
Score = 34.7 bits (78), Expect = 1e-06
Identities = 22/62 (35%), Positives = 30/62 (48%)
Query: 4 GVDFSHANMVRVDAHDAKLNRARLIGANLRGANLTGAELVGADFTGSNLENAILHGADIS 63
G + + M V A A + A + L ANL A+ GAD G++L A L GAD+
Sbjct: 154 GANLQRSKMAGVIAVKADFSGAVMKDCKLVRANLKQADFRGADLAGADLSGADLSGADLR 213
Query: 64 GA 65
A
Sbjct: 214 DA 215
Score = 34.3 bits (77), Expect = 2e-06
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 10/60 (16%)
Query: 19 DAKLNRARLIGANLRGANLTGAELVGADFTG----------SNLENAILHGADISGANFT 68
+ + + A L GANL+ + + G V ADF+G +NL+ A GAD++GA+ +
Sbjct: 144 ETEASGACLAGANLQRSKMAGVIAVKADFSGAVMKDCKLVRANLKQADFRGADLAGADLS 203
Score = 32.7 bits (73), Expect = 5e-06
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 6/80 (7%)
Query: 11 NMVRVDAHDAKLNRARLIGANLRGANLTGAELVGADFTGSNLENAILHGADISGANFTKT 70
N+ + A A + G L+GA L A+L A ++L A L GA ++GA+
Sbjct: 289 NLTALSAKGAVFYGLDMEGVQLQGAQLDNADLRSAKLRRADLRGARLRGARLNGAD---- 344
Query: 71 TGLTHEMLGAAIGSQDTILP 90
+ LG + + D ++P
Sbjct: 345 --MREAQLGPLLIAADRLMP 362
Score = 32.3 bits (72), Expect = 6e-06
Identities = 18/44 (40%), Positives = 22/44 (50%)
Query: 24 RARLIGANLRGANLTGAELVGADFTGSNLENAILHGADISGANF 67
RA +L G +L G L ADF + LE L GA + ANF
Sbjct: 37 RAVFAWMDLSGLSLKGRNLADADFAAACLEGCDLTGAKLDNANF 80
Score = 29.6 bits (65), Expect = 4e-05
Identities = 17/60 (28%), Positives = 24/60 (40%)
Query: 27 LIGANLRGANLTGAELVGADFTGSNLENAILHGADISGANFTKTTGLTHEMLGAAIGSQD 86
+ G NL + GA G D G L+ A L AD+ A + + GA + D
Sbjct: 285 ITGLNLTALSAKGAVFYGLDMEGVQLQGAQLDNADLRSAKLRRADLRGARLRGARLNGAD 344
Score = 28.5 bits (62), Expect = 9e-05
Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 10/55 (18%)
Query: 10 ANMVRVDAHDAKLNRARLIGANLRGANLTGAELVG----------ADFTGSNLEN 54
AN+ + D A L A L GA+L GA+L A LVG AD G+ +N
Sbjct: 185 ANLKQADFRGADLAGADLSGADLSGADLRDAILVGCKTTMWRADGADMQGALTDN 239
Score = 23.1 bits (48), Expect = 0.004
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 4 GVDFSHANMVRVDAHDAKLNRARLIGANLRGANLTGAELVGA 45
G D + A++ D A L A L+G GA++ GA
Sbjct: 194 GADLAGADLSGADLSGADLRDAILVGCKTTMWRADGADMQGA 235