Pairwise Alignments

Query, 953 a.a., excinuclease ABC, A subunit (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 977 a.a., excinuclease ABC subunit UvrA from Rhodanobacter sp000427505 FW510-R12

 Score = 1163 bits (3009), Expect = 0.0
 Identities = 589/946 (62%), Positives = 725/946 (76%), Gaps = 9/946 (0%)

Query: 7   IEVRGAREHNLKSIDVDIPRDRLVVITGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQ 66
           I +RGAR HNLK+ID+D+PRD+L+VITGLSGSGKSSLAFDTIYAEGQRRYVESLS+YARQ
Sbjct: 4   IRIRGARTHNLKNIDLDLPRDQLIVITGLSGSGKSSLAFDTIYAEGQRRYVESLSSYARQ 63

Query: 67  FLDMMQKPDVDHISGLSPAISIEQKTTSKNPRSTVGTVTEIYDYMRLLFARVGTPYSPAT 126
           FL MM+KPDVDHI GLSPAISIEQK+TS NPRSTVGT+TE+YDY+RLL+ARVGTP  P  
Sbjct: 64  FLSMMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEVYDYLRLLYARVGTPRCPDH 123

Query: 127 GLPIEAQQVQDMVDRVMAMEEGTRAYLLAPIIRDRKGEYRKEFLELRKQGFQRVKVDGAF 186
           G P+EAQ V  MVD  +A++   R  LLAP+IR+RKGE+ + F +LR QGF R +VDGA 
Sbjct: 124 GTPLEAQTVSQMVDATLALDPEQRYMLLAPVIRERKGEHVQVFEQLRAQGFVRTRVDGAV 183

Query: 187 HDLDSPPTLDKKFRHDIDVVVDRIVVKEGIETRLADSFRTALDLADGIAILETAPTEGEP 246
           +DLD+ P L  + +H I+VVVDR   +E I+ RLA+SF TAL L DG+ IL      G P
Sbjct: 184 YDLDAVPPLGLRIKHTIEVVVDRFRPREDIKQRLAESFETALRLGDGLVILANMDVPGAP 243

Query: 247 ERHTFSEKFACPVSGFTIPEIEPRLFSFNAPFGACPACDGLGVELFFDERLVVPDATLTL 306
           E+   S +++CPV  +++PE+EPRLFSFN+P GACPACDGLGV   FD   VV    L+L
Sbjct: 244 EQ-MLSSRYSCPVCDYSLPELEPRLFSFNSPIGACPACDGLGVTQVFDPARVVGHPELSL 302

Query: 307 ANGALAPWRKGKSPYFLQTINAIAKHYEFDPKTPWKALPEKVQEVFLRGSGEEEITFRY- 365
           A+GA+  W +  + YF Q I ++A HY FD  TPW  LP  VQ+  L GSG++ I FRY 
Sbjct: 303 ASGAVRGWDRRNAHYF-QLILSLAAHYGFDVDTPWNKLPADVQKAILYGSGKDRIAFRYI 361

Query: 366 -DEGGRVYQVSRAFEGVIPNMERRYRETDSSWIREEFERYQNNRSCGTCGGYRLRPEALA 424
            + GG+V +   AFEG++PN+ERRY+ET+S+ +REE  +Y +++ C  C G RL   A  
Sbjct: 362 TERGGKVTR-EHAFEGILPNLERRYKETESAAVREELAKYISDQPCPACEGQRLNRSARN 420

Query: 425 VKIAGLHVGEVVQMSIREAHDWCRTVPEHLSVQKNEIARAILKEIRERLGFLNNVGLEYL 484
           V +A   +  +   SI +A  +   +   L+  + EIA  I+KEIRERL FLN+VGL YL
Sbjct: 421 VFVADHALPALTHRSIDDALAFFEELK--LTGWRGEIAVKIVKEIRERLTFLNDVGLNYL 478

Query: 485 TLSRNAGTLSGGESQRIRLASQIGSGLTGVLYVLDEPSIGLHQRDNDRLLTTLKNLRDQG 544
           TL R A +LSGGE+QRIRLASQIG+GL GV+YVLDEPSIGLHQRDN+RLL TL  LRD G
Sbjct: 479 TLDRQADSLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLTRLRDLG 538

Query: 545 NTVIVVEHDEEAVREADYVFDIGPGAGVHGGQVVAHGTPAQIMANPASITGDYLAGRREI 604
           NTVIVVEHDE+A+R AD+V DIGPGAGVHGG+VVA GT   ++ +P S+TG +L+G R I
Sbjct: 539 NTVIVVEHDEDAIRMADHVLDIGPGAGVHGGEVVAQGTVQDMLDSPRSVTGQFLSGVRAI 598

Query: 605 PVPATRRK--GNKKKVTVRKATGNNLQDLTVDFPLGKFVCVTGVSGGGKSTLTIETLFKT 662
            VP  RR+   +   + +  A+GNNL+++ +  P G F CVTGVSG GKSTL  +TLF+ 
Sbjct: 599 EVPKERRQPIDDDSWLRLNGASGNNLKNVDLAIPAGLFTCVTGVSGSGKSTLVNDTLFRL 658

Query: 663 ASMRLNGARQTPAPCETIKGLEHLDKVIDIDQRPIGRTPRSNPATYTGAFTPIRDWFAGL 722
           A+  LNGA    AP ++++GL+  DKV+DIDQ PIGRTPRSNPATYTG FTP+R+ FA +
Sbjct: 659 AAAELNGAGTQAAPYQSVQGLQLFDKVVDIDQSPIGRTPRSNPATYTGLFTPLREMFAQV 718

Query: 723 PEARTRGYKPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDVYVECETCKGKRYNRETLEV 782
           PEAR RGY PGRFSFNV+GGRCEAC+GDG++K+EMHFLPDVYV C+ C GKRYNRETLEV
Sbjct: 719 PEARARGYTPGRFSFNVRGGRCEACEGDGMLKVEMHFLPDVYVPCDVCHGKRYNRETLEV 778

Query: 783 TFKGKSIADVLDMTVEDAQEFFKAVPSIREKMDALMRVGLGYIKVGQQATTLSGGEAQRV 842
            +KG +IADVLDMTVEDA + F+ VP+I  K+D L  VGL YIK+GQ ATTLSGGEAQRV
Sbjct: 779 LYKGHTIADVLDMTVEDALKLFENVPTIARKLDTLRAVGLDYIKLGQSATTLSGGEAQRV 838

Query: 843 KLSKELAKRSTGRTLYILDEPTTGLHFEDVRKLLEVLHELVEQGNTVVVIEHNLDVIKTA 902
           KLSKEL+KR TG TLYILDEPTTGLHF D+ +LL+VLH+LV+QGNTVVVIEHNLDVIKTA
Sbjct: 839 KLSKELSKRDTGNTLYILDEPTTGLHFHDIEQLLDVLHQLVDQGNTVVVIEHNLDVIKTA 898

Query: 903 DWLIDIGPEGGDGGGTLVATGTPEQVAEVAESHTGRYLKPMLAGAK 948
           DW++D+GPEGG GGG ++  GTPE VA  AESHTG +L P L  AK
Sbjct: 899 DWVVDLGPEGGAGGGRILVAGTPETVAATAESHTGHFLAPHLRPAK 944