Pairwise Alignments

Query, 953 a.a., excinuclease ABC, A subunit (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 1045 a.a., UvrABC system protein A from Xanthobacter sp. DMC5

 Score = 1394 bits (3609), Expect = 0.0
 Identities = 683/946 (72%), Positives = 792/946 (83%), Gaps = 3/946 (0%)

Query: 3   ELKKIEVRGAREHNLKSIDVDIPRDRLVVITGLSGSGKSSLAFDTIYAEGQRRYVESLSA 62
           + + + VRGAREHNLK++D++IPRD LVV TGLSGSGKSSLAFDTIYAEGQRRYVESLSA
Sbjct: 24  DARTLSVRGAREHNLKNVDLEIPRDSLVVFTGLSGSGKSSLAFDTIYAEGQRRYVESLSA 83

Query: 63  YARQFLDMMQKPDVDHISGLSPAISIEQKTTSKNPRSTVGTVTEIYDYMRLLFARVGTPY 122
           YARQFL+MMQKPDVD I GLSPAISIEQKTTSKNPRSTVGTVTEIYDYMRLL+AR G PY
Sbjct: 84  YARQFLEMMQKPDVDQIDGLSPAISIEQKTTSKNPRSTVGTVTEIYDYMRLLWARTGVPY 143

Query: 123 SPATGLPIEAQQVQDMVDRVMAMEEGTRAYLLAPIIRDRKGEYRKEFLELRKQGFQRVKV 182
           SPATGLPIE+Q V  MVDR +A+ EGTR YLLAP++R RKGEYRKE  +  K+GFQRVKV
Sbjct: 144 SPATGLPIESQTVSQMVDRTLALPEGTRLYLLAPVVRGRKGEYRKELADWMKKGFQRVKV 203

Query: 183 DGAFHDLDSPPTLDKKFRHDIDVVVDRIVVKEGIETRLADSFRTALDLADGIAILETAPT 242
           +GAFH++   P LDKKF+HDIDVVVDRIVV+  +  RLADSF TAL LADGIA+ E A  
Sbjct: 204 NGAFHEIAEAPALDKKFKHDIDVVVDRIVVRADLAQRLADSFETALGLADGIAVAEFADE 263

Query: 243 E---GEPERHTFSEKFACPVSGFTIPEIEPRLFSFNAPFGACPACDGLGVELFFDERLVV 299
           +   G P R  FSEKFACPVSGFTIPEIEPRLFSFN PFGACPACDGLGVE   D  LVV
Sbjct: 264 KDEAGAPRRIIFSEKFACPVSGFTIPEIEPRLFSFNNPFGACPACDGLGVEQTIDPDLVV 323

Query: 300 PDATLTLANGALAPWRKGKSPYFLQTINAIAKHYEFDPKTPWKALPEKVQEVFLRGSGEE 359
           PD   +L  GA+APW K  SPY+ QT++A+AKHY F    P+  LPE+ +EV L GSG E
Sbjct: 324 PDKARSLKQGAIAPWAKSTSPYYGQTLDALAKHYHFKLNVPFADLPEQAREVLLFGSGSE 383

Query: 360 EITFRYDEGGRVYQVSRAFEGVIPNMERRYRETDSSWIREEFERYQNNRSCGTCGGYRLR 419
           +ITF YD+G R Y+ S+ FEGV+ N++RR++ETDS W REE  +Y +   C  C GYRL+
Sbjct: 384 KITFHYDDGMRAYETSKTFEGVVRNLDRRWKETDSDWAREEISKYFSTVPCKVCNGYRLK 443

Query: 420 PEALAVKIAGLHVGEVVQMSIREAHDWCRTVPEHLSVQKNEIARAILKEIRERLGFLNNV 479
           PEALAVKIAG H+GE+ ++S+R A  W  ++P  L+ ++NEIA  ILKEIRERL FL +V
Sbjct: 444 PEALAVKIAGRHIGEIGELSVRAAAGWFESLPAQLTDKQNEIAGRILKEIRERLRFLLDV 503

Query: 480 GLEYLTLSRNAGTLSGGESQRIRLASQIGSGLTGVLYVLDEPSIGLHQRDNDRLLTTLKN 539
           GLEYLTL+R++GTLSGGESQRIRLASQIGSGLTGVLYVLDEPSIGLHQRDN+RLL TLK+
Sbjct: 504 GLEYLTLARSSGTLSGGESQRIRLASQIGSGLTGVLYVLDEPSIGLHQRDNERLLGTLKH 563

Query: 540 LRDQGNTVIVVEHDEEAVREADYVFDIGPGAGVHGGQVVAHGTPAQIMANPASITGDYLA 599
           LRD GNTVIVVEHDE+A+  AD+V D+GPGAG+HGG++VA GTPA+I+ANPAS+TG YL 
Sbjct: 564 LRDLGNTVIVVEHDEDAILAADHVVDVGPGAGIHGGEIVAQGTPAEILANPASLTGRYLT 623

Query: 600 GRREIPVPATRRKGNKKKVTVRKATGNNLQDLTVDFPLGKFVCVTGVSGGGKSTLTIETL 659
           G   + VPA R+   K+ + +  A GNNL+++T + PLG F C+TGVSGGGKSTL I+TL
Sbjct: 624 GELSVGVPARRKPNPKRMLKLTGARGNNLKNVTAEIPLGLFTCITGVSGGGKSTLLIDTL 683

Query: 660 FKTASMRLNGARQTPAPCETIKGLEHLDKVIDIDQRPIGRTPRSNPATYTGAFTPIRDWF 719
           +K  + RLNGA + PAP + ++GLEHLDKVIDIDQ PIGRTPRSNPATYTGAFTPIR+WF
Sbjct: 684 YKAVARRLNGASEAPAPFDKLEGLEHLDKVIDIDQSPIGRTPRSNPATYTGAFTPIREWF 743

Query: 720 AGLPEARTRGYKPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDVYVECETCKGKRYNRET 779
           AGLPEA+ RGY  GRFSFNVKGGRCEACQGDGVIKIEMHFLPDVYV C+ CKGKRYNRET
Sbjct: 744 AGLPEAKARGYGAGRFSFNVKGGRCEACQGDGVIKIEMHFLPDVYVTCDVCKGKRYNRET 803

Query: 780 LEVTFKGKSIADVLDMTVEDAQEFFKAVPSIREKMDALMRVGLGYIKVGQQATTLSGGEA 839
           LEVTFK KSIADVLDMTVE+  +FFKAVPS+REK++ L RVGL Y+KVGQQATTLSGGEA
Sbjct: 804 LEVTFKNKSIADVLDMTVEEGAQFFKAVPSVREKLETLHRVGLDYVKVGQQATTLSGGEA 863

Query: 840 QRVKLSKELAKRSTGRTLYILDEPTTGLHFEDVRKLLEVLHELVEQGNTVVVIEHNLDVI 899
           QRVKLSKEL++R+TGRTLYILDEPTTGLHF DV+KLLEVLHELVEQGN+VVVIEHNL+VI
Sbjct: 864 QRVKLSKELSRRATGRTLYILDEPTTGLHFHDVKKLLEVLHELVEQGNSVVVIEHNLEVI 923

Query: 900 KTADWLIDIGPEGGDGGGTLVATGTPEQVAEVAESHTGRYLKPMLA 945
           KTADW++D+GPEGGDGGG +V  GTPE VA    SHTGR+L  +LA
Sbjct: 924 KTADWILDLGPEGGDGGGEIVVAGTPETVAASKRSHTGRFLAEVLA 969