Pairwise Alignments

Query, 953 a.a., excinuclease ABC, A subunit (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 943 a.a., excinuclease ABC subunit UvrA from Dickeya dianthicola ME23

 Score = 1159 bits (2998), Expect = 0.0
 Identities = 579/944 (61%), Positives = 728/944 (77%), Gaps = 7/944 (0%)

Query: 4   LKKIEVRGAREHNLKSIDVDIPRDRLVVITGLSGSGKSSLAFDTIYAEGQRRYVESLSAY 63
           + KIE+RGAR HNLK+I++ IPRD+L+V+TGLSGSGKSSLAFDT+YAEGQRRYVESLSAY
Sbjct: 1   MDKIEIRGARTHNLKNINLIIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60

Query: 64  ARQFLDMMQKPDVDHISGLSPAISIEQKTTSKNPRSTVGTVTEIYDYMRLLFARVGTPYS 123
           ARQFL +M+KPDVDHI GLSPAISIEQK+TS NPRSTVGT+TEI+DY+RLLFARVG P  
Sbjct: 61  ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120

Query: 124 PATGLPIEAQQVQDMVDRVMAMEEGTRAYLLAPIIRDRKGEYRKEFLELRKQGFQRVKVD 183
           P   +P++AQ V  MVD V++  EG R  LLAPI+++RKGE+ K    L  QG+ R ++D
Sbjct: 121 PEHAIPLDAQTVSQMVDNVLSQPEGKRLMLLAPIVKERKGEHTKTLENLATQGYIRARID 180

Query: 184 GAFHDLDSPPTLDKKFRHDIDVVVDRIVVKEGIETRLADSFRTALDLADGIAILETAPTE 243
           G   DL  PP L+ + +H IDVVVDR  V+  +  RLA+SF TAL+L+ G A++      
Sbjct: 181 GEVCDLSDPPKLELQKKHTIDVVVDRFKVRNDLAQRLAESFETALELSGGTAVVADMDDP 240

Query: 244 GEPERHTFSEKFACPVSGFTIPEIEPRLFSFNAPFGACPACDGLGVELFFDERLVVPDAT 303
             PE   FS  FACPV G+++ E+EPRLFSFN P GACP CDGLGV+ FFD   VV +  
Sbjct: 241 NAPEL-LFSANFACPVCGYSMHELEPRLFSFNNPAGACPTCDGLGVQQFFDPARVVQNGE 299

Query: 304 LTLANGALAPWRKGKSPYFLQTINAIAKHYEFDPKTPWKALPEKVQEVFLRGSGEEEITF 363
           L+LA GA+  W + ++ Y+ Q + ++A+HY+FD + P+  L   VQ+V L GSG+E I F
Sbjct: 300 LSLAGGAIRGWDR-RNFYYFQMLRSLAEHYQFDVEAPFDNLSPAVQKVILYGSGKENIEF 358

Query: 364 RY-DEGGRVYQVSRAFEGVIPNMERRYRETDSSWIREEFERYQNNRSCGTCGGYRLRPEA 422
           +Y ++ G        FEGV+ NMERRY+ET+S+ +REE  ++ +NR C +C G RLR EA
Sbjct: 359 KYINDRGDTSVRRHPFEGVLNNMERRYKETESTAVREELAKFISNRPCASCNGTRLREEA 418

Query: 423 LAVKIAGLHVGEVVQMSIREAHDWCRTVPEHLSVQKNEIARAILKEIRERLGFLNNVGLE 482
             V +    + ++  MSI  A  +   +   LS Q+ +IA  +LKEI +RL FL NVGL 
Sbjct: 419 RHVYVEQTTLPQIADMSIGHAMAFFHNIK--LSGQRAKIAEKVLKEIGDRLRFLVNVGLN 476

Query: 483 YLTLSRNAGTLSGGESQRIRLASQIGSGLTGVLYVLDEPSIGLHQRDNDRLLTTLKNLRD 542
           YL+LSR+A TLSGGE+QRIRLASQIG+GL GV+YVLDEPSIGLHQRDN+RLL TL +LR+
Sbjct: 477 YLSLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLETLIHLRN 536

Query: 543 QGNTVIVVEHDEEAVREADYVFDIGPGAGVHGGQVVAHGTPAQIMANPASITGDYLAGRR 602
            GNTVIVVEHDE+A+R AD++ DIGPGAGVHGGQV+A GT AQIMA P S+TG +L+G R
Sbjct: 537 LGNTVIVVEHDEDAIRAADHIIDIGPGAGVHGGQVIAEGTAAQIMAEPESLTGQFLSGAR 596

Query: 603 EIPVPATRRKGNKKKVT-VRKATGNNLQDLTVDFPLGKFVCVTGVSGGGKSTLTIETLFK 661
           +I +P  R   +  KV  +  A GNNL+D+T+  P+G F C+TGVSG GKSTL  +TLF 
Sbjct: 597 KIEIPTQRIPADPGKVLKLIGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFP 656

Query: 662 TASMRLNGAR-QTPAPCETIKGLEHLDKVIDIDQRPIGRTPRSNPATYTGAFTPIRDWFA 720
            A  +LNG     PA    I+GLEH DKVIDIDQ PIGRTPRSNPATYTG FTPIR+ FA
Sbjct: 657 IAQRQLNGGELNEPAAYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPIRELFA 716

Query: 721 GLPEARTRGYKPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDVYVECETCKGKRYNRETL 780
           G+PEAR+RGY PGRFSFNV+GGRCEACQGDGVIK+EMHFLPD+YV C+ CK KRYNRETL
Sbjct: 717 GVPEARSRGYNPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKSKRYNRETL 776

Query: 781 EVTFKGKSIADVLDMTVEDAQEFFKAVPSIREKMDALMRVGLGYIKVGQQATTLSGGEAQ 840
           E+ +KGKSI +VL+MT+E+A+EFF A+P++  K+  L+ VGL YI++GQ ATTLSGGEAQ
Sbjct: 777 EIKYKGKSIHEVLEMTIEEAREFFDAIPALARKLQTLIDVGLSYIRLGQSATTLSGGEAQ 836

Query: 841 RVKLSKELAKRSTGRTLYILDEPTTGLHFEDVRKLLEVLHELVEQGNTVVVIEHNLDVIK 900
           RVKL++EL+KR TG+TLYILDEPTTGLHF D+++LL VLH+L +QGNT+VVIEHNLDVIK
Sbjct: 837 RVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLTVLHQLRDQGNTIVVIEHNLDVIK 896

Query: 901 TADWLIDIGPEGGDGGGTLVATGTPEQVAEVAESHTGRYLKPML 944
           TADW++D+GPEGG GGG ++ +GTPE VA+  +SHT R+LKP+L
Sbjct: 897 TADWIVDLGPEGGSGGGEILVSGTPETVAQCEKSHTARFLKPIL 940