Pairwise Alignments

Query, 512 a.a., amino acid carrier protein (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 476 a.a., predicted transporter (NCBI) from Escherichia coli BW25113

 Score =  215 bits (547), Expect = 3e-60
 Identities = 148/455 (32%), Positives = 234/455 (51%), Gaps = 42/455 (9%)

Query: 57  IVLWLVVAASI-FTVYFGFIQLRGFVHSIKLVKGDYADPDDAGEVSHFQALATALSGTVG 115
           ++++L+  A   FT   GF+Q R      K +K         G ++ FQ+L T+L+  VG
Sbjct: 16  VMIYLLFGAGCWFTFRTGFVQFRYIRQFGKSLKNSIHP--QPGGLTSFQSLCTSLAARVG 73

Query: 116 LGNIAGVAVAVGIGGPGATFWMIFAGLLGMASKFTECTLGVKYRNEYPDGTVSGGPMYYI 175
            GN+AGVA+A+  GGPGA FWM  A  +GMA+ F EC+L   Y+    +G   GGP +Y+
Sbjct: 74  SGNLAGVALAITAGGPGAVFWMWVAAFIGMATSFAECSLAQLYKERDVNGQFRGGPAWYM 133

Query: 176 SKGFAEKGMPGGKFMAVLFSIFCILGALGGGNMFQANQAH--AQISGIVGDYPGWITGII 233
           ++G       G ++M VLF++F ++     G +F   QA+  A+      D+P  +TGII
Sbjct: 134 ARGL------GMRWMGVLFAVFLLIAY---GIIFSGVQANAVARALSFSFDFPPLVTGII 184

Query: 234 FAAVVFAVIVGGIKSIAKVTEKVVPFMGILYVAAALVILLVNIDQIGWAFGQIFEGAFTG 293
            A      I  G+  +A++ +  VP M I++V  +LVI ++NI Q+      IFE AF  
Sbjct: 185 LAVFTLLAITRGLHGVARLMQGFVPLMAIIWVLTSLVICVMNIGQLPHVIWSIFESAFGW 244

Query: 294 LGVAGGFVG-----ALIQGFKRAAFSNEAGVGSA--AIAHSAVKTKEPVTEGYVSLLEPF 346
              AGG  G     A+  GF+R+ FSNEAG+GS   A A +A     P  +G V ++  F
Sbjct: 245 QEAAGGAAGYTLSQAITNGFQRSMFSNEAGMGSTPNAAAAAASWPPHPAAQGIVQMIGIF 304

Query: 347 IDTVVICTMTALVITISGQ-LMINPDTGLYMVENGAIMTVDGNSGVALTSAAFATGFSWF 405
           IDT+VICT +A++I ++G      P  G+ +++  A+  + G               SW 
Sbjct: 305 IDTLVICTASAMLILLAGNGTTYMPLEGIQLIQK-AMRVLMG---------------SWG 348

Query: 406 PYVLAIAVVLFAFSTMISWSYYGLKAWTYLFGEGRTKELVFKVIFCVF--VVIGAAASLG 463
              + + V+LFAFS++++   Y        F      + ++ +  C F  V+ G   SL 
Sbjct: 349 AEFVTLVVILFAFSSIVANYIYAEN--NLFFLRLNNPKAIWCLRICTFATVIGGTLLSLP 406

Query: 464 PVIDFSDAAIFAMAVVNIAALYVLMPVVKAELASY 498
            +   +D  +  MA+ N+ A+ +L PVV    + Y
Sbjct: 407 LMWQLADIIMACMAITNLTAILLLSPVVHTIASDY 441