Pairwise Alignments

Query, 810 a.a., Nitrite reductase (NAD(P)H) (EC 1.7.1.4) (from data) from Dinoroseobacter shibae DFL-12

Subject, 854 a.a., nitrite reductase large subunit NirB from Paraburkholderia sabiae LMG 24235

 Score =  502 bits (1293), Expect = e-146
 Identities = 299/771 (38%), Positives = 430/771 (55%), Gaps = 20/771 (2%)

Query: 4   ELVIIGAGMASGRVIEHLLKEDPDAFEITLFNAEPRGNYNRIMLSPVLSGDKSYADIITH 63
           ++++IG GM   +++E L ++     +IT+   EPR  Y+R+ LS   SG KS  D+   
Sbjct: 2   KVIVIGHGMVGHKLLECLAEQTAARLDITVLCEEPRPAYDRVHLSEFFSG-KSADDLSLV 60

Query: 64  TDDWYEQNGITCRFGEHVVRIDRETGTVVGQRG-ALPYDKLLIATGSAPFIIPVEGKDLP 122
              +++++ +  R     V IDR+  TV    G  L YDKL+IA+GS  F+ PV GKD  
Sbjct: 61  APGFFDRDDMVLRLNAKAVSIDRDAHTVTTSTGETLAYDKLVIASGSYAFVPPVPGKDRK 120

Query: 123 GVITYRDLDDTNAMIEAAASGGKAVVIGGGLLGLEAAAGLKERGMDVTVLHLMGHLMERQ 182
               YR ++D  AM E  A     VVIGGGLLGLE A  L++ G++  V+     LM  Q
Sbjct: 121 DCFVYRTIEDLEAMQECGARSKTGVVIGGGLLGLECAKALRDMGLETHVVEFAPRLMAVQ 180

Query: 183 LDESAGFLLRRDLEKRGIKVKCRASTAAIL-GETRVEGVLLEDNEGLEADLVVMAVGIRP 241
           +D+  G +LR  +E+ G+ V  + +T  I+ GE     +   D   L+ D++V + GIRP
Sbjct: 181 VDDGGGKVLRGKIEELGVTVHTQKNTLEIVDGEEGTHRMQFADGSHLDTDMIVFSAGIRP 240

Query: 242 ETRLATDAGLDVAR--GITVDAELRTSDPDIHAVGECVEFDGQLFGLVAPLYDQARVVAD 299
              +A   GL+V    GI +D + RTSD DI+A+GEC  ++GQ+FGLVAP Y+ ARV A 
Sbjct: 241 RDEIARACGLEVGARGGIVIDNQCRTSDADIYAIGECALWNGQIFGLVAPGYEMARVTAK 300

Query: 300 SLLG-RSAAFTPKELSTKLKVTGCDLFSAGD-FADGAGREDIVFRDPSRGVYKRLVLEE- 356
            LLG + AAF   ++STKLK+ G D+ S GD  A  AG     F D  + VYK+LV+ + 
Sbjct: 301 QLLGEKEAAFAGADMSTKLKLMGVDVASLGDAHASTAGSRTYQFSDERKQVYKKLVVSDC 360

Query: 357 -NRLVGAVFYGDTRDSNWFFGLIQSGEDISEMRDTLIFGPAYQGGAALDPMAAVAALPLD 415
              L+G V  GD  +      ++ +   + E  + LI  P   G A   P   V ALP  
Sbjct: 361 GKFLLGGVMVGDASEYGTLLQMMLNRIQLPESPEFLIL-PQADGNAK--PALGVDALPES 417

Query: 416 AEICGCNGVSKGDIVAAIEGGATDLGTVRSLTKASSSCGTCTGLVEQVLGVTLGDDFVIP 475
           A+IC CN +SKG I A++  GAT +G V++ TKA ++CG C  LV QV+   +     + 
Sbjct: 418 AQICSCNNISKGAICASVCAGATTIGDVKNATKAGTACGGCVPLVTQVMKAEMKKQG-LA 476

Query: 476 AAASICGCTDLSHEDVRRMIKSRELKSMAAVWQELGWKTSCGCHVCRPALNFYLLADWP- 534
               +C     S +++  +++   +K+  A+  + G     GC +C+PA+   L + W  
Sbjct: 477 VNNHLCEHFPFSRQELYHLVRVERIKTFGALLDKHGH--GLGCDICKPAVAGILASCWNE 534

Query: 535 -LEYRDDPQSRFINERKHANIQKDGTYSVVPRMWGGMTTPDELRAIADAAEKYNVPTVHV 593
            +  ++    +  N+   ANIQ+DGTYSVVPRM GG  TP+ L A+   A+KY + T  +
Sbjct: 535 FVLKKEHASLQDSNDYYLANIQRDGTYSVVPRMPGGEVTPEGLIAVGQVAKKYGLYT-KI 593

Query: 594 TGGQRIDLLGVRGEDLPAIWADLNAAGMVSGHAYAKGLRTVKTCVGKDHCRFGTQDSTGL 653
           TGGQR+DL G R E LP+IW +L AAG  SGHAY K +RTVK+CVG   CR+G  DS GL
Sbjct: 594 TGGQRVDLFGARVEQLPSIWEELIAAGFESGHAYGKSVRTVKSCVGSTWCRYGVDDSVGL 653

Query: 654 GIALEKRLWGSWTPHKVKLAVSGCPRNCAEATCKDIGVVCVDSGYQIGVAGAAGMDVKET 713
            I +E R  G  +PHK+K AVSGC R CAEA  KD+G++  + G+ + V G  GM  +  
Sbjct: 654 AIDIENRYKGLRSPHKLKFAVSGCTRECAEAQSKDVGIIATEKGWNLYVCGNGGMKPRHA 713

Query: 714 ERLADVATEQEALDLITAFFQLYRENAKYLDRPYKWVAKV--GLDWVKDQV 762
           E +A        +  I  F   Y   A  L R   W   +  GLD++KD +
Sbjct: 714 ELIASDLDRDTLIRYIDRFLMFYVRTADRLQRTSVWRENLEGGLDYLKDVI 764