Pairwise Alignments

Query, 561 a.a., nitrate ABC transporter, ATPase subunits C and D (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 265 a.a., nitrate ABC transporter ATPase from Agrobacterium fabrum C58

 Score =  242 bits (618), Expect = 1e-68
 Identities = 127/253 (50%), Positives = 170/253 (67%), Gaps = 1/253 (0%)

Query: 290 FLDFSQLHKVYPTPKGPLTVVEDFDLKLNKGEFISLIGHSGCGKSTVLTMAAGLNEISKG 349
           +L    + K +        V++  +L + KGEF+S+IGHSGCGKST+L + AGL ++S G
Sbjct: 4   YLKLDHIDKYFDKGGSRAEVLKGINLTIEKGEFVSVIGHSGCGKSTMLNLIAGLTKVSAG 63

Query: 350 AIKLDGRHVEGADPERAVVFQSPSLFPWLTARENVSVGVDRVYPNA-SQAERQDVVEYYL 408
           A+ L+ R V    PERAVVFQ+ SL PWL+  ENV++ V +V+ N  ++ ER D V   L
Sbjct: 64  AVLLENREVNEPGPERAVVFQNHSLLPWLSVYENVNLAVAKVFRNTKTRTERHDWVMRNL 123

Query: 409 ERVGLADSMSKSGAELSNGMKQRVGIARAFALSPKLLLLDEPFGMLDSLTRWELQEVLME 468
           + V +A +  K  +E+S GMKQRVGIARA A+ PK+LLLDEPFG LD+LTR  LQ+ +ME
Sbjct: 124 DLVQMAHAKDKKPSEISGGMKQRVGIARALAMEPKILLLDEPFGALDALTRAHLQDAVME 183

Query: 469 VWSRTKVTAICVTHDVDEAILLADRVVMMTNGPRATIGKITDVNLPRPRTRKALLEHPDY 528
           + +R   T + +THDVDEA+LL+DR+VMMTNGP A IG++ DV L RPR R  L     Y
Sbjct: 184 IHARLGNTMVMITHDVDEAVLLSDRIVMMTNGPAAHIGEVLDVPLARPRNRIELASDKIY 243

Query: 529 YTYRQEVLDFLEE 541
              R+ VL FL E
Sbjct: 244 LKCREAVLKFLYE 256



 Score =  219 bits (559), Expect = 8e-62
 Identities = 112/252 (44%), Positives = 172/252 (68%), Gaps = 3/252 (1%)

Query: 4   IEFKNVSKSFGSGPNRADVLRDINLTVKEGEFLVLLGFSGTGKTTLINLMAGLEVPTKGE 63
           ++  ++ K F  G +RA+VL+ INLT+++GEF+ ++G SG GK+T++NL+AGL   + G 
Sbjct: 5   LKLDHIDKYFDKGGSRAEVLKGINLTIEKGEFVSVIGHSGCGKSTMLNLIAGLTKVSAGA 64

Query: 64  VLFKGAQITEPSPERGVIFQNYSLMPWLTVNGNVRLAVDTMFPKL-SKAARQAKVDHYVK 122
           VL +  ++ EP PER V+FQN+SL+PWL+V  NV LAV  +F    ++  R   V   + 
Sbjct: 65  VLLENREVNEPGPERAVVFQNHSLLPWLSVYENVNLAVAKVFRNTKTRTERHDWVMRNLD 124

Query: 123 MVGLCHATTRRPAELSGGMRQRVNVARALAMNPEVLLLDEPLSALDALTRANLADEIEGI 182
           +V + HA  ++P+E+SGGM+QRV +ARALAM P++LLLDEP  ALDALTRA+L D +  I
Sbjct: 125 LVQMAHAKDKKPSEISGGMKQRVGIARALAMEPKILLLDEPFGALDALTRAHLQDAVMEI 184

Query: 183 WEKEKKTCVLITNDVDEAIVLADRIIAL--NPDGTLGDEFAVTIPRPRDRVEMNTHVGFK 240
             +   T V+IT+DVDEA++L+DRI+ +   P   +G+   V + RPR+R+E+ +   + 
Sbjct: 185 HARLGNTMVMITHDVDEAVLLSDRIVMMTNGPAAHIGEVLDVPLARPRNRIELASDKIYL 244

Query: 241 KLRADITKYLMD 252
           K R  + K+L +
Sbjct: 245 KCREAVLKFLYE 256