Pairwise Alignments

Query, 392 a.a., putative nitrate transport protein (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 425 a.a., ABC transporter substrate-binding protein from Dickeya dadantii 3937

 Score =  167 bits (422), Expect = 7e-46
 Identities = 112/362 (30%), Positives = 170/362 (46%), Gaps = 21/362 (5%)

Query: 6   LNIGYLPLVDAAPLIIAQKMGFADTEGIRLALHKQPSWSALRDGVALGTLDAGHMLSPLP 65
           + IG++PL D A +++A   GF    GI +   K+ SW+A+RD +  G LDA H+L  L 
Sbjct: 55  VRIGFIPLTDCASVVMASVKGFDKKYGITIVPSKEASWAAVRDKLVSGELDAAHVLYGLL 114

Query: 66  VAMSLGLGGLPTAMDALLVMSVNGNVIGVSNGLASKMRSNGWREDFRDPLATGKHLIRAS 125
             +  G  G    M AL+ ++ NG  I +SN L     ++G         A+ K  I AS
Sbjct: 115 YGLQAGAAGPQHNMAALMTLNNNGQAITLSNKLCEAGVTDG---------ASLKRFIAAS 165

Query: 126 -GRKLRIGVPFPFSMHAELVYFWLNALGLKTPDELDVRTVPPPHMADAIAANEIDAFCVG 184
                     FP   HA  +Y+WL A G+   D++    VPPP M   +    +  FCVG
Sbjct: 166 PAGTYTFAQTFPTGTHAMWLYYWLGAAGINPFDDVRTVVVPPPQMVVNMKIGNMSGFCVG 225

Query: 185 EPWGSIAVETGVGELILPANSIWTFSPEKVLAARRDWIETNPAETRALMRAVVTAARWL- 243
           EPW   A+  G+G     +  IW   PEKVL    +W+  NP   RAL  AV+ A+RW+ 
Sbjct: 226 EPWNQRAITDGLGFTAATSQDIWPDHPEKVLGTTAEWVNANPNTARALTAAVLDASRWID 285

Query: 244 GDPENRLVASEILAQPGLIDVPSEVIDRALSGQI---TSKPKALAHRVPRFLEFHASAAN 300
              +NR   + ++A    ++   E I   + GQ      K    AH + RF  +H    N
Sbjct: 286 SSDDNRRETARVIAGRAYVNTQEETIAGRMLGQYDDGAGKRWQDAHAM-RF--YHDGEVN 342

Query: 301 FPWRSQAAWIASNIAARVGL--DRTEAMRISMACYRSDLYRANLTDLGLDMPGASAKMEG 358
           FP+ S   W  +    R GL     +   ++    R D+Y+   + +G ++P  S +M  
Sbjct: 343 FPYLSDGMWFLTQ-HKRWGLLAQEPDYQAVARQVNRIDIYKQAASAVG-NVPLPSGEMRS 400

Query: 359 AL 360
           ++
Sbjct: 401 SV 402