Pairwise Alignments

Query, 355 a.a., recA protein (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 353 a.a., RecA protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  443 bits (1140), Expect = e-129
 Identities = 217/321 (67%), Positives = 270/321 (84%), Gaps = 1/321 (0%)

Query: 16  DKQKALDSALAQIERQFGKGSIMKLGADSPVAEIEATSTGSIGLDIALGIGGIPKGRIIE 75
           +KQKAL +AL QIE+QFGKGSIM+LG D  + ++E  STGS+ LDIALG GG+P GRI+E
Sbjct: 6   NKQKALAAALGQIEKQFGKGSIMRLGEDRSM-DVETISTGSLSLDIALGAGGLPMGRIVE 64

Query: 76  IYGPESSGKTTLTLHCIAEEQKKGGVCAFVDAEHALDPQYARKLGVDLDELLISQPDTGE 135
           IYGPESSGKTTLTL  IA  Q++G  CAF+DAEHALDP YARKLGVD+D LL SQPDTGE
Sbjct: 65  IYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDTGE 124

Query: 136 QALEITETLVRSGAVSMVVVDSVAALTPKSELEGDMGDAQVGAQARLMSQAMRKLTGAIS 195
           QALEI + L RSGAV ++VVDSVAALTPK+E+EG++GD+ +G  AR+MSQAMRKL G + 
Sbjct: 125 QALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184

Query: 196 RSNCTVIFINQIRMKIGVMFGSPETTSGGNALKFYSSVRLDIRRIGSVKDRDEIVGNTTK 255
           +SN  +IFINQIRMKIGVMFG+PETT+GGNALKFY+SVRLDIRRIG+VK+ D +VG+ T+
Sbjct: 185 QSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAVKEGDNVVGSETR 244

Query: 256 VKVVKNKVAPPFKQVEFDIIYGEGISKMGELIDLGVKAGVVQKSGSWFSYGDERIGQGRE 315
           VKVVKNK+A PFKQ EF I+YGEGI+  GEL+DLGVK  +++K+G+W+SY  E+IGQG+ 
Sbjct: 245 VKVVKNKIAAPFKQAEFQILYGEGINFYGELVDLGVKEKLIEKAGAWYSYNGEKIGQGKA 304

Query: 316 NAKQYLRDNTRTALELEDKIR 336
           NA  +L++N  TA E+E ++R
Sbjct: 305 NATTWLKENPATAKEIEKRVR 325