Pairwise Alignments

Query, 355 a.a., recA protein (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 353 a.a., recombinase A (NCBI) from Escherichia coli BW25113

 Score =  444 bits (1143), Expect = e-129
 Identities = 223/340 (65%), Positives = 276/340 (81%), Gaps = 7/340 (2%)

Query: 16  DKQKALDSALAQIERQFGKGSIMKLGADSPVAEIEATSTGSIGLDIALGIGGIPKGRIIE 75
           +KQKAL +AL QIE+QFGKGSIM+LG D  + ++E  STGS+ LDIALG GG+P GRI+E
Sbjct: 6   NKQKALAAALGQIEKQFGKGSIMRLGEDRSM-DVETISTGSLSLDIALGAGGLPMGRIVE 64

Query: 76  IYGPESSGKTTLTLHCIAEEQKKGGVCAFVDAEHALDPQYARKLGVDLDELLISQPDTGE 135
           IYGPESSGKTTLTL  IA  Q++G  CAF+DAEHALDP YARKLGVD+D LL SQPDTGE
Sbjct: 65  IYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYARKLGVDIDNLLCSQPDTGE 124

Query: 136 QALEITETLVRSGAVSMVVVDSVAALTPKSELEGDMGDAQVGAQARLMSQAMRKLTGAIS 195
           QALEI + L RSGAV ++VVDSVAALTPK+E+EG++GD+ +G  AR+MSQAMRKL G + 
Sbjct: 125 QALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184

Query: 196 RSNCTVIFINQIRMKIGVMFGSPETTSGGNALKFYSSVRLDIRRIGSVKDRDEIVGNTTK 255
           +SN  +IFINQIRMKIGVMFG+PETT+GGNALKFY+SVRLDIRRIG+VK+ + +VG+ T+
Sbjct: 185 QSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAVKEGENVVGSETR 244

Query: 256 VKVVKNKVAPPFKQVEFDIIYGEGISKMGELIDLGVKAGVVQKSGSWFSYGDERIGQGRE 315
           VKVVKNK+A PFKQ EF I+YGEGI+  GEL+DLGVK  +++K+G+W+SY  E+IGQG+ 
Sbjct: 245 VKVVKNKIAAPFKQAEFQILYGEGINFYGELVDLGVKEKLIEKAGAWYSYKGEKIGQGKA 304

Query: 316 NAKQYLRDNTRTALELEDKIRAA------HGLDFQMPDSE 349
           NA  +L+DN  TA E+E K+R           DF + DSE
Sbjct: 305 NATAWLKDNPETAKEIEKKVRELLLSNPNSTPDFSVDDSE 344