Pairwise Alignments

Query, 355 a.a., recA protein (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 355 a.a., recombinase RecA from Erwinia tracheiphila SCR3

 Score =  447 bits (1149), Expect = e-130
 Identities = 221/340 (65%), Positives = 279/340 (82%), Gaps = 4/340 (1%)

Query: 16  DKQKALDSALAQIERQFGKGSIMKLGADSPVAEIEATSTGSIGLDIALGIGGIPKGRIIE 75
           +KQKAL +AL QIE+QFGKGSIM+LG D  + ++E  STGS+ LDIALG GG+P GRI+E
Sbjct: 6   NKQKALAAALGQIEKQFGKGSIMRLGEDRTM-DVETISTGSLSLDIALGAGGLPMGRIVE 64

Query: 76  IYGPESSGKTTLTLHCIAEEQKKGGVCAFVDAEHALDPQYARKLGVDLDELLISQPDTGE 135
           IYGPESSGKTTLTL  IA  Q+KG  CAF+DAEHALDP YA+KLGVD+D LL SQPDTGE
Sbjct: 65  IYGPESSGKTTLTLQVIAAAQRKGKTCAFIDAEHALDPVYAKKLGVDIDNLLCSQPDTGE 124

Query: 136 QALEITETLVRSGAVSMVVVDSVAALTPKSELEGDMGDAQVGAQARLMSQAMRKLTGAIS 195
           QALEI + L RSGAV +++VDSVAALTPK+E+EG++GD+ +G  AR+MSQAMRKL G + 
Sbjct: 125 QALEICDALARSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLK 184

Query: 196 RSNCTVIFINQIRMKIGVMFGSPETTSGGNALKFYSSVRLDIRRIGSVKDRDEIVGNTTK 255
           +SN  +IFINQIRMKIGVMFG+PETT+GGNALKFY+SVRLDIRRIG++K+ DE+VG+ T+
Sbjct: 185 QSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAIKEGDEVVGSETR 244

Query: 256 VKVVKNKVAPPFKQVEFDIIYGEGISKMGELIDLGVKAGVVQKSGSWFSYGDERIGQGRE 315
           VKVVKNKVA PFKQ EF I+YGEGI+ +GEL+DLGVK  +++K+G+W+SY  ++IGQG+ 
Sbjct: 245 VKVVKNKVAAPFKQAEFQIMYGEGINVLGELVDLGVKHKLIEKAGAWYSYNGDKIGQGKA 304

Query: 316 NAKQYLRDNTRTALELEDKIRAAHGLDFQMPDSEAEILDD 355
           NA  +L++N   A E+E K+RA   +    PDS+ +   D
Sbjct: 305 NAGNFLKENPAIASEIESKLRA---MLLNNPDSKPDFSAD 341