Pairwise Alignments

Query, 333 a.a., putative TIM-barrel protein, nifR3 family (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 321 a.a., tRNA dihydrouridine synthase DusB from Escherichia coli ECRC62

 Score =  229 bits (583), Expect = 9e-65
 Identities = 131/287 (45%), Positives = 170/287 (59%), Gaps = 2/287 (0%)

Query: 5   LAEQPLANPVLLAPMAGITDLPFRNVVSRFGAGLVVSEMVASQEMVQAKASVRARAELGF 64
           + +  L N ++ APMAGITD PFR +    GAGL VSEM++S   V      R R     
Sbjct: 3   IGQYQLRNRLIAAPMAGITDRPFRTLCYEMGAGLTVSEMMSSNPQVWESDKSRLRMVHID 62

Query: 65  GAQATAVQLAGREAYWMGEAARYVADQGARVIDINMGCPAKKVVNGASGSALMRDLDHAL 124
                 VQ+AG +   M +AAR   + GA++IDINMGCPAKKV    +GSAL++  D   
Sbjct: 63  EPGIRTVQIAGSDPKEMADAARINVESGAQIIDINMGCPAKKVNRKLAGSALLQYPDVVK 122

Query: 125 TLIDAVVAAVDVPVTLKTRLGWDDDCLNAPDLARRAEAAGIAMVTIHGRTRCQFYKGAAD 184
           +++  VV AVDVPVTLK R GW  +  N  ++A+ AE  GI  +TIHGRTR   + G A+
Sbjct: 123 SILTEVVNAVDVPVTLKIRTGWAPEHRNCEEIAQLAEDCGIQALTIHGRTRACLFNGEAE 182

Query: 185 WTAIGRVKRAVSIPVIANGDIVDTAAAAQARAASGADGLMVGRGAQGRPWRLAEIAAAL- 243
           + +I  VK+ VSIPVIANGDI D   A      +GAD LM+GR AQGRPW   EI   L 
Sbjct: 183 YDSIRAVKQKVSIPVIANGDITDPLKARAVLDYTGADALMIGRAAQGRPWIFREIQHYLD 242

Query: 244 YGAPAPDIPSGDALVDLVLAHFEAMLAFYGPELGLRTARKHLGWYME 290
            G   P +P  + +  L+ AH   +  FYGP  G R ARKH+ WY++
Sbjct: 243 TGELLPPLPLAE-VKRLLCAHVRELHDFYGPAKGYRIARKHVSWYLQ 288