Pairwise Alignments

Query, 287 a.a., binding-protein-dependent transport systems inner membrane component (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 299 a.a., ABC transporter permease from Paraburkholderia sabiae LMG 24235

 Score = 73.9 bits (180), Expect = 4e-18
 Identities = 65/230 (28%), Positives = 94/230 (40%), Gaps = 8/230 (3%)

Query: 28  RIGAFLWSGWAGLAALALLFAAW---QAGHEAYGPFILSAPLDTMGTVGALAVDPAAWEI 84
           R+ AF    W GL      FA W    A H A    ++S P+D   T        A    
Sbjct: 41  RLAAF---NWRGLVLPLAAFALWWLVSALHVAKSGLLVS-PVDVAHTAWQQIQSGALLRA 96

Query: 85  AALTLQRALSGFFLVAAAGTALGVAAGYFPAILRLVTPLVTVLLGVPPIAWIVLAMIWFG 144
            + +L R  SGF +   +G  LG A G+     RL+ P       +   AWI L  +WFG
Sbjct: 97  LSASLAREASGFLIGTVSGLLLGAALGFSRIATRLIGPTFDTFKQISLFAWIPLISVWFG 156

Query: 145 GSDATVRTVILISALPVVFMGAARGITTRDRRLDRLAEAFGAGPLRRFLTMGLRQTTTTL 204
             D      + ++AL  V      GI     R   +A AF    L+    + L     ++
Sbjct: 157 LGDMAKVVFLSLAALLPVAAHTCDGIHAVPPRYVEVARAFRYSRLQMARFVILPAALPSI 216

Query: 205 FPALALALGTAFKVAVMAELLANAG-GIGGALADARINLDIELALAWVLI 253
           F  + LAL  ++   + AE L  AG GIG  L D      ++L L  +++
Sbjct: 217 FTGIYLALIYSWLATLGAEYLLVAGSGIGNTLIDGSEQFRMDLVLFGIIV 266