Pairwise Alignments

Query, 402 a.a., inner-membrane translocator (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 305 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  143 bits (361), Expect = 6e-39
 Identities = 88/277 (31%), Positives = 146/277 (52%), Gaps = 29/277 (10%)

Query: 45  LMQRFVIFGIFAIGFNILFGLTGYLSFGHAAFLGVGSYAAIWMMKLLTMNVIPAIIMAIV 104
           L+ R +IF + A     + G  G +SFGHAA +G+G+YA   +M+    + + +  +A+ 
Sbjct: 28  LVARAMIFALAATSLGFILGQGGLVSFGHAATMGIGAYAVGILMEEGVRDALVSFPVAMA 87

Query: 105 LAGLFSLLVGWISLRRSGIYFSILTLAFAQMSYALAYSVLTPITGGETGLQPKVNDPRLL 164
            AGLF+L+ G ISLR  G+YF ++TLAF QM++ +  S+     GG+ GL          
Sbjct: 88  AAGLFALVTGAISLRTRGVYFIMITLAFGQMAFFVTQSLSA--YGGDDGL---------- 135

Query: 165 DPALAEGATPSANLFGLTMKSSYELNVGGWLFTFNAGYYLAAVIMLISFYVAIRIFRSPF 224
             +LA  +T +                  WL      +Y+   ++  +  V+  + R+PF
Sbjct: 136 --SLAARSTVAG---------------ARWLKDPKTFHYVVLGLLACTVLVSTVLARAPF 178

Query: 225 GMMLRAVKSNQQRMNYTGLNSKPYTLAAFVISGMYAGLAGGLMVAMDTQVGPERMFWTAS 284
           G +L A + N++R+   G++   Y L A+VI+G +AGLAG L   +   V P  + W  S
Sbjct: 179 GRVLAAGRDNERRLRALGVDPYAYRLVAYVIAGAFAGLAGALYANLTEFVSPAYLSWHRS 238

Query: 285 GEVVLMTILGGAGTLIGPVLGAGMIKYMENIISKINE 321
            E ++M + GG  T +GPVLGA  +  +E+ ++ + E
Sbjct: 239 AEFIVMVVAGGPATALGPVLGALGVVLLEDGLAHLTE 275