Pairwise Alignments

Query, 402 a.a., inner-membrane translocator (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 330 a.a., Broad-specificity amino acid ABC transporter, permease protein 2 from Variovorax sp. SCN45

 Score =  176 bits (447), Expect = 7e-49
 Identities = 113/341 (33%), Positives = 172/341 (50%), Gaps = 49/341 (14%)

Query: 35  MAQFNAGYPDLMQRFVIFGIFAIGFNILFGLTGYLSFGHAAFLGVGSYAAIWMMKLLTMN 94
           +A F   YP  + + + F +FA  FN+L G TG LSFGHAAFLG  +Y A   MK+  + 
Sbjct: 20  LAPFFGAYPVFVMKLMCFALFAAAFNLLLGFTGLLSFGHAAFLGGSAYVAGHAMKVWGLT 79

Query: 95  VIPAIIMAIVLAGLFSLLVGWISLRRSGIYFSILTLAFAQMSYALAYSVLTPITGGETGL 154
               +I   +       + G +++RR GIYF+++TLA AQM + +A  +    TGGE GL
Sbjct: 80  PELGLIAGTLTGAFLGWVFGVLAIRRQGIYFAMITLALAQMMFFVA--LQAKFTGGEDGL 137

Query: 155 QPKVNDPRLLDPALAEGATPSANLFGLTMKSSYELNVGGWLFTFNAGYYLAAVIMLISFY 214
           Q                  P   LFGL   SS +L +          YY+A VI++ +F 
Sbjct: 138 Q----------------GVPRGKLFGLIDLSS-DLTM----------YYVALVIVVAAFL 170

Query: 215 VAIRIFRSPFGMMLRAVKSNQQRMNYTGLNSKPYTLAAFVISGMYAGLAGGLMVAMDTQV 274
           + +R   SPFG +L+ +K N+ R    G +   + L AFVIS   +GLAG L   +    
Sbjct: 171 LIVRTIHSPFGQVLKGIKENEPRALSLGYDVSRFKLLAFVISAALSGLAGSLKTLVLGFA 230

Query: 275 GPERMFWTASGEVVLMTILGGAGTLIGPVLGAGMIKYMENIISKINETILH----QWFAF 330
               + WTASG+V+LMT++GG GTL GP++G+ ++  +EN I ++   +       WF  
Sbjct: 231 TLSDVHWTASGQVILMTLVGGLGTLSGPLVGSAVVVLLENKIGELGSFLARITTIDWFNT 290

Query: 331 LPDGMEDALVAMVYPFIGKGWHLTLGIIFMLVVIFLPGGLV 371
           L                G+   +  G+IF++ V+    G++
Sbjct: 291 L----------------GESVTMVTGLIFVICVLAFRKGIM 315