Pairwise Alignments

Query, 402 a.a., inner-membrane translocator (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 339 a.a., Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  167 bits (423), Expect = 4e-46
 Identities = 113/354 (31%), Positives = 177/354 (50%), Gaps = 52/354 (14%)

Query: 45  LMQRFVIFGIFAIGFNILFGLTGYLSFGHAAFLGVGSYAAIWMMKLLTMNVIPAIIMAIV 104
           L    +IF + A+  N+L G TG LSFG   F GVG+Y A  +M  L   +  A++ A V
Sbjct: 37  LATEILIFAMAALACNLLLGYTGLLSFGQGIFFGVGAYGAALLMIHLQWGMFAALLGAAV 96

Query: 105 LAGLFSLLVGWISLRRSGIYFSILTLAFAQMSYALAYSVLTPITGGETGLQPKVNDPRLL 164
                +LLVG +++RR+GIYF +LTLAF+QM+Y LAY+ L+  TGG+ GL   ++ PR  
Sbjct: 97  FGAFLALLVGALAIRRTGIYFVMLTLAFSQMAYFLAYT-LSGWTGGDNGL---LDVPR-- 150

Query: 165 DPALAEGATPSANLFGLTMKSSYELNVGGWLFTFNAGYYLAAVIMLISFYVAIRIFRSPF 224
                    P+  + G  +           L      Y   AV+ L+ F  A+R+ RSPF
Sbjct: 151 ---------PNIEIAGHVLVD---------LADPRHFYVFVAVLFLLIFAAALRVIRSPF 192

Query: 225 GMMLRAVKSNQQRMNYTGLNSKPYTLAAFVISGMYAGLAGGLMVAMDTQVGPERMFWTAS 284
           G  L A++ N+ R    G +++ + +  F++SG   G+AG L   +        +    S
Sbjct: 193 GSTLLAIRENETRAAAIGYDTRHFKILVFMLSGAITGIAGALYAMLLHFAPLSNIDLMMS 252

Query: 285 GEVVLMTILGGAGTLIGPVLGAGMIKYMENIISKINETILHQWFAFLPDGMEDALVAMVY 344
             +++MTI+GG G+L G +LGAG I  + +++S++       W                 
Sbjct: 253 ENILIMTIVGGTGSLFGSLLGAGAIVLLGDVLSEL-------W----------------- 288

Query: 345 PFIGKGWHLTLGIIFMLVVIFLPGGLVEGGQRIARLFGRGKKADAEGDKKSAET 398
                 W + LG+I +LVV+F+ GGL  G   + +     + AD +   K+ ET
Sbjct: 289 ----PRWLMLLGVILILVVVFMRGGLWGGLTELGKRLLATRNADDKPQAKTKET 338