Pairwise Alignments

Query, 333 a.a., permease protein of ABC transporter (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 338 a.a., Hydroxymethylpyrimidine ABC transporter, substrate-binding component from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 76.6 bits (187), Expect = 8e-19
 Identities = 73/289 (25%), Positives = 123/289 (42%), Gaps = 16/289 (5%)

Query: 10  AIALVCGASAASAENAKVVFGTNWLAQAEHGGFYQSVADGTYAACGLDVEIISGGPQVNN 69
           A+  +  A+A++    K  F  NW A  +H  ++ ++  G YA  GLDV + +     ++
Sbjct: 15  ALFALLPATASAQAKEKFTFALNWFAVGDHAAYWVALDKGYYAQRGLDVTLENSKGSGDS 74

Query: 70  RALMLAGRIDYHMGGDMLQAFNAVKEDIPVVMVAATFQKHPQVILAH---PGEADSWEEL 126
            A +   R D  +  D +   +A      V MV   F K P    +H   P       E 
Sbjct: 75  IAKVDTSRADAGLA-DAVPVISAASRGARVKMVGMVFDKTPMTFFSHADAPLLKPKDLEG 133

Query: 127 KDLTLLIGDNGFTSYYQWMIAEHGFTVEQRQPYTFNPAPF-----IADKRV-GMQGYLSS 180
           K +    GD+   ++  +        ++  +    N  P      IA+KRV G+  Y + 
Sbjct: 134 KTVAAPAGDSQRLAFPAFARLNQ---IDPNKVSWVNIEPTAKVASIAEKRVDGVADYTTG 190

Query: 181 EPFAVEKEAGFKPNVFLIADAGFSSYATMVETMQATIDEKPEQVKCFVEGSIKGWYNYLY 240
           +PF  +     K      AD GF  YA  +   + T+ +KP+Q+K F+E S  GW + + 
Sbjct: 191 QPFYDKAMGPGKAVRLQWADYGFDLYAMSIIAGEKTMADKPKQLKAFLEASYMGWRDVM- 249

Query: 241 GDPSAANELIKAANPDMTDDKLAFARNMMKDEGIVDSGDALEMGIGAIN 289
            +P  A  + K   P++  D      NMM    ++ +    + GIG I+
Sbjct: 250 ANPKEALAIFKKRVPEI--DVAIIEANMMMGFDLMRTKGYADNGIGWID 296