Pairwise Alignments

Query, 493 a.a., DEAD/DEAH box helicase domain protein (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 453 a.a., ATP-dependent RNA helicase RhlE from Serratia liquefaciens MT49

 Score =  332 bits (850), Expect = 2e-95
 Identities = 186/384 (48%), Positives = 249/384 (64%), Gaps = 14/384 (3%)

Query: 4   FSDLNLDPKVLKAISEAGYDTPTPIQAEAIPPALEGRDVLGIAQTGTGKTASFTLPMITM 63
           F  L L  ++L+A+ E GY  PTPIQ +AIP  LEGRD++  AQTGTGKTA FTLP++ +
Sbjct: 3   FETLGLSAEILRAVEEQGYREPTPIQRQAIPVVLEGRDLMASAQTGTGKTAGFTLPLLQL 62

Query: 64  LRKGR--ARARMP-RSLVLAPTRELAAQVAENFDIYAKHTKLTKALLIGGVSFKEQDLLI 120
           L K     + R P R+L+L PTRELAAQ+ EN + Y+K+ +L   ++ GGVS   Q + +
Sbjct: 63  LSKHDHPVKGRRPVRALILTPTRELAAQIGENVEAYSKYLRLRSLVVFGGVSINPQMMKL 122

Query: 121 DKGVDVLIATPGRLLDHFERGKLILTDVKVMVVDEADRMLDMGFIPDIEKIFQLTPFTRQ 180
             GVD+L+ATPGRLLD   +  + L+ V+++V+DEADRMLDMGFI DI ++    P  RQ
Sbjct: 123 RGGVDILVATPGRLLDLEHQRAVDLSKVEILVLDEADRMLDMGFIHDIRRVLAKLPAKRQ 182

Query: 181 TLFFSATMAPEIERITNTFLSNPARVEVARQSTTSETITQGLVQFKPSRRDRATAFKEKR 240
            L FSAT + +I+ + N  L NPA VEVAR++T SE I Q  V F   +R        KR
Sbjct: 183 NLLFSATFSDDIKGLANKLLHNPASVEVARRNTASEQIEQS-VHFVDKKR--------KR 233

Query: 241 EMLRALIEREGDGCRNAIIFCNRKMDVDVVAKSLIKHGYDAAPIHGDLEQSQRTKTLDQF 300
           E+L  +I  EGD  +  ++F   K   + +A+ L K G  AA IHG+  Q  RT+ L  F
Sbjct: 234 ELLSQMI-GEGD-WKQVLVFNRTKHGANHLAEQLNKDGITAAAIHGNKSQGARTRALADF 291

Query: 301 RDGTLKFLVASDVAARGLDIPNVSHVFNFDVPSHAEDYVHRIGRTGRAGRKGTTLMLAVP 360
           +DG ++ LVA+D+AARGLDI  + HV N+++P+  EDYVHRIGRTGRA R G  + L   
Sbjct: 292 KDGKIRVLVATDIAARGLDIDQLPHVVNYELPNVPEDYVHRIGRTGRAERTGEAISLVCV 351

Query: 361 ADDKLLAAIEDLVKLEIPRIEAPG 384
            + KLL  IE L+K EIPRI  PG
Sbjct: 352 DEHKLLRDIERLLKREIPRIALPG 375