Pairwise Alignments

Query, 493 a.a., DEAD/DEAH box helicase domain protein (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 416 a.a., Superfamily II DNA and RNA helicases from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  324 bits (830), Expect = 4e-93
 Identities = 181/411 (44%), Positives = 251/411 (61%), Gaps = 19/411 (4%)

Query: 3   KFSDLNLDPKVLKAISEAGYDTPTPIQAEAIPPALEGRDVLGIAQTGTGKTASFTLPMIT 62
           KF DL + P +LKA+ + GYD PT IQA+AIP  LEGRDVLG AQTGTGKTA+F +P+I 
Sbjct: 2   KFKDLRIIPPILKALEDKGYDEPTSIQAQAIPHILEGRDVLGCAQTGTGKTAAFAIPIIQ 61

Query: 63  MLRKGRARARMP----RSLVLAPTRELAAQVAENFDIYAKHTKLTKALLIGGVSFKEQDL 118
            + +    A  P    RSL++ PTRELA Q+ EN D YAK+T ++  ++ GGV    Q  
Sbjct: 62  HIHEA-PYANEPWAKIRSLIVTPTRELAIQIGENIDEYAKNTNVSHTVIFGGVKQGAQVA 120

Query: 119 LIDKGVDVLIATPGRLLDHFERGKLILTDVKVMVVDEADRMLDMGFIPDIEKIFQLTPFT 178
            + KGV +L+ATPGRLLD  ++G + L  + + V+DEADRMLDMGFI DI+K+ ++ P  
Sbjct: 121 QLKKGVHILVATPGRLLDLIDQGHISLKAIDLFVLDEADRMLDMGFINDIKKLLKILPKK 180

Query: 179 RQTLFFSATMAPEIERITNTFLSNPARVEVARQSTTSETITQGLVQFKPSRRDRATAFKE 238
           RQ+LFFSATM   I +++   L NP +VEV   S+T+ETI Q +     S          
Sbjct: 181 RQSLFFSATMPDNILQLSKEILDNPQKVEVTPVSSTAETIQQYIYYTNKS---------S 231

Query: 239 KREMLRALIEREGDGCRNAIIFCNRKMDVDVVAKSLIKHGYDAAPIHGDLEQSQRTKTLD 298
           K+ +L  ++E+E  G    ++F   K   D + + L K    AA IHGD  Q+QR + L 
Sbjct: 232 KKSLLIHILEKE--GMDQVLLFSRTKHGADRIVRDLKKKHIKAAAIHGDKAQNQRQRVLS 289

Query: 299 QFRDGTLKFLVASDVAARGLDIPNVSHVFNFDVPSHAEDYVHRIGRTGRAGRKGTTLMLA 358
            F+D  L+ LVA+D+AARG+DI  + +V NFD+P   E Y+HRIGR+GRAG +GT + L 
Sbjct: 290 DFKDNKLRVLVATDIAARGIDIDKLKYVINFDIPDTPETYIHRIGRSGRAGEEGTAISLC 349

Query: 359 VPADDKLLAAIEDLVKLEIPRIE---APGISAPQGGRSKDEERPEPEKRER 406
            P ++  + AIE L    I  I     P    P   + K E   E ++R++
Sbjct: 350 EPEENADVKAIEKLANKNITVISDHPFPQTDKPMTAQEKKEFNKEKQRRKQ 400