Pairwise Alignments

Query, 479 a.a., proton-translocating NADH-quinone oxidoreductase, chain N (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 487 a.a., NADH:ubiquinone oxidoreductase subunit N from Pseudomonas simiae WCS417

 Score =  226 bits (577), Expect = 1e-63
 Identities = 142/374 (37%), Positives = 204/374 (54%), Gaps = 16/374 (4%)

Query: 67  MFVDDSFARFAKITILLSAAAILVMSLDHMSKLGI----LKFEYPILIALAVVGMMMMVS 122
           M VDD FA      IL++  A + ++  ++ + G      + E  +LI LA  G +++VS
Sbjct: 67  MMVDD-FALLYIALILVATLACVTLAHAYLGEGGTGYPGNREELYLLILLAAAGGIVLVS 125

Query: 123 AGDLMALYMGLELQSLALYVVASIHRDDSRSTEAGLKYFVLGALSSGMLLYGASLTYGYA 182
           A  L  L++GLEL S+  Y + +    + RS EAG+KY VL A  S  LL+G +L Y  A
Sbjct: 126 AQHLAGLFIGLELLSIPTYGLVAYAFFNKRSLEAGIKYMVLSAAGSAFLLFGMALLYAEA 185

Query: 183 GTTLFSGI--ITTATEGEISMGLLFGLVFLTAGLAFKVSAAPFHMWTPDVYEGSPTPVTA 240
           G   F+GI     AT     +  L GL  +  GLAFK+S  PFH+WTPDVYEG+P PV A
Sbjct: 186 GNLSFTGIGHALAATSMPAPVAQL-GLAMMLIGLAFKLSLVPFHLWTPDVYEGAPAPVAA 244

Query: 241 LFATAPKVAAMALFARVVHDAFGNAIGDWQQIVAFLAVLSMFLGSIAAIGQTDIKRLMAY 300
             ATA KVA  A+  R+   +     G    ++  +A+ S+  G++ A+ Q ++KRL+ Y
Sbjct: 245 FLATASKVAVFAVMVRLFQISPAANTGVLSTVLTVIAIASILFGNLLALTQNNLKRLLGY 304

Query: 301 SSIAHMGFALMGLAAGTVGGVQAMLIYMAIYVTMNIGTFAFILSME-----KDGVAVTEI 355
           SSIAH G+ L+ L A     V+AM +Y+  YV  ++G F  I  M      +D  A+ E 
Sbjct: 305 SSIAHFGYLLIALVASKGLAVEAMGVYLVTYVITSLGAFGVITLMSSPFKGRDADALYEY 364

Query: 356 ASLNQFASREPTKAMALLLLMFSLAGIPPLLGFFGKYTVLLAAVDGGLTWLAIAGVMASV 415
             L     R P     L ++M SLAGIP   GF GK+ ++   V+    WL  + V+ S 
Sbjct: 365 RGL---FWRRPYLTAVLTVMMLSLAGIPLTAGFIGKFYIVATGVEAHEWWLVASLVLGSA 421

Query: 416 IGAFYYLRIVYYMY 429
           IG FYYLR++  +Y
Sbjct: 422 IGVFYYLRVMVTLY 435