Pairwise Alignments

Query, 479 a.a., proton-translocating NADH-quinone oxidoreductase, chain N (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 489 a.a., NADH-quinone oxidoreductase subunit N from Pseudomonas putida KT2440

 Score =  224 bits (572), Expect = 4e-63
 Identities = 138/379 (36%), Positives = 210/379 (55%), Gaps = 15/379 (3%)

Query: 62  VAFGGMFVDDSFARFAKITILLSAAAILVMSLDHMSKLGILKF-----EYPILIALAVVG 116
           +A   +   D FA      IL++  A + ++  ++ + G   F     E  +L+ ++ +G
Sbjct: 61  LAVTSLITIDKFACLYMAIILVATLACVTLAHAYLGE-GAKGFPGNREELYLLLLMSALG 119

Query: 117 MMMMVSAGDLMALYMGLELQSLALYVVASIHRDDSRSTEAGLKYFVLGALSSGMLLYGAS 176
            +++VSA  L  L++GLEL S+ +Y + +    + RS EAG+KY VL A  S  LL+G +
Sbjct: 120 GLVLVSANHLAGLFIGLELLSVPVYGLVAYAFFNKRSLEAGIKYMVLSAAGSAFLLFGMA 179

Query: 177 LTYGYAGTTLFSGI-ITTATEGEISMGLLFGLVFLTAGLAFKVSAAPFHMWTPDVYEGSP 235
           L Y  AG+  F  I    AT    S+    GL  +  GLAFK+S  PFH+WTPDVYEG+P
Sbjct: 180 LLYADAGSLSFDQIGKALATTSMPSLVAQLGLGMMLVGLAFKLSLVPFHLWTPDVYEGAP 239

Query: 236 TPVTALFATAPKVAAMALFARVVHDAFGNAIGDWQQIVAFLAVLSMFLGSIAAIGQTDIK 295
            PV A  ATA KVA  A+  R+   +   + G    ++A +AV S+ +G++ A+ Q+++K
Sbjct: 240 APVAAFLATASKVAVFAVVVRLFMLSPAASSGVLSTVLAVIAVASILIGNLLALTQSNLK 299

Query: 296 RLMAYSSIAHMGFALMGLAAGTVGGVQAMLIYMAIYVTMNIGTFAFILSME-----KDGV 350
           RL+ YSSIAH G+ ++ L A     ++AM +Y+  YV  ++G F  I  M      +D  
Sbjct: 300 RLLGYSSIAHFGYLVIALVASKGLALEAMGVYLVTYVITSLGAFGVITLMSSPYGGRDAD 359

Query: 351 AVTEIASLNQFASREPTKAMALLLLMFSLAGIPPLLGFFGKYTVLLAAVDGGLTWLAIAG 410
           A+ E   L     R P     L ++M SLAGIP   GF GK+ ++   V+  L WL  A 
Sbjct: 360 ALYEYRGL---FWRRPYLTAVLTVMMLSLAGIPLTAGFIGKFYIIATGVESHLWWLVGAL 416

Query: 411 VMASVIGAFYYLRIVYYMY 429
           V+ S IG +YYLR++  +Y
Sbjct: 417 VIGSAIGVYYYLRVMVTLY 435