Pairwise Alignments

Query, 479 a.a., proton-translocating NADH-quinone oxidoreductase, chain N (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 485 a.a., NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  214 bits (545), Expect = 5e-60
 Identities = 132/400 (33%), Positives = 210/400 (52%), Gaps = 15/400 (3%)

Query: 71  DSFARFAKITILLSAAAILVMSLDHMSKLGILKFEYPILIALAVVGMMMMVSAGDLMALY 130
           D FA      +LL++ A    +   +      + E+ +L+ +A +G +++ +A  L AL+
Sbjct: 70  DGFAMLYTGLVLLASLATCTFAYPWLEGYNDNQEEFYLLVLIASLGGILLANANHLAALF 129

Query: 131 MGLELQSLALYVVASIHRDDSRSTEAGLKYFVLGALSSGMLLYGASLTYGYAGTTLFSGI 190
           +G+EL SL L+ +        RS EA +KY +L A +S  LL+G +L Y  +G   F  +
Sbjct: 130 LGIELISLPLFGLIGYAFRQKRSLEASIKYTILSAAASSFLLFGMALVYAQSGNLSFEAL 189

Query: 191 ITTATEGEISMGLLF-GLVFLTAGLAFKVSAAPFHMWTPDVYEGSPTPVTALFATAPKVA 249
             +  +G +   LL  G   +  GL FK+S  PFH+WTPDVY+G+P PV+   ATA K+A
Sbjct: 190 GKSLGDGMLHEPLLLAGFGLMIVGLGFKLSLVPFHLWTPDVYQGAPAPVSTFLATASKIA 249

Query: 250 AMALFARVVHDAFGNAIGDWQQ---IVAFLAVLSMFLGSIAAIGQTDIKRLMAYSSIAHM 306
              +  R+   A    +GD +    ++  +A  S+  G++ A+ QT+IKRL+ YSSI+H+
Sbjct: 250 IFGVVMRLFLYA---PVGDSEAVRVVLGIIAFASIIFGNLMALSQTNIKRLLGYSSISHL 306

Query: 307 GFALMGLAAGTVG--GVQAMLIYMAIYVTMNIGTFAFILSMEKD--GVAVTEIASLNQFA 362
           G+ L+ L A   G   ++A+ +Y+A Y+  ++G F  +  M     G     + S     
Sbjct: 307 GYLLVALIALQSGEMSMEAVGVYLAGYLFSSLGAFGVVSLMSSPFRGPDADSLYSYRGLF 366

Query: 363 SREPTKAMALLLLMFSLAGIPPLLGFFGKYTVLLAAVDGGLTWLAIAGVMASVIGAFYYL 422
              P  A  + ++M SLAGIP  LGF GK+ VL   V   L WL  A V+ S IG +YYL
Sbjct: 367 WHRPVLAAVMTVMMLSLAGIPMTLGFIGKFYVLAVGVQASLWWLVAAVVVGSAIGLYYYL 426

Query: 423 RIVYYMYFGKADDALEGSMPMVQYG----FLMASAVIMLV 458
           R+   +Y          +    QY      ++ SA+++LV
Sbjct: 427 RVAVSLYLHAPQQPGRDAPTNWQYSAGGIVVLISALLVLV 466