Pairwise Alignments

Query, 433 a.a., NADH-quinone oxidoreductase, F subunit (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 451 a.a., NADH dehydrogenase from Pseudomonas simiae WCS417

 Score =  323 bits (827), Expect = 9e-93
 Identities = 170/394 (43%), Positives = 238/394 (60%), Gaps = 6/394 (1%)

Query: 25  KRGHWDGTDKLIQMGRDDIVKIMKDSGLRGRGGAGFPTGLKWSFMPKESDGRPHYLVVNA 84
           K G+         M +DDIV+ +KD+GL+GRGGAGFPTG+KW  MPK+      YL+ NA
Sbjct: 40  KNGYAAARKAFADMAQDDIVQTVKDAGLKGRGGAGFPTGVKWGLMPKDESINIRYLLCNA 99

Query: 85  DESEPGTCKDREIMRHDPHTLIEGCLIASFAMGAHASYIYIRGEYIREREALQAAIDEAY 144
           DE EP T KDR +M   PH LIEG LI++ A+  +  YI++RGEY    + L  A++EA 
Sbjct: 100 DEMEPNTWKDRMLMEQLPHLLIEGMLISARALKTYRGYIFLRGEYTTAAKHLNRAVEEAK 159

Query: 145 EAGLLGKNAAGSGWDFDLYLTHGAGAYICGEETALIESLEGKKGMPRMKPPFPAGAGLYG 204
            AGLLGKN  GSG+DF+L++  GAG YICGEETALI SLEG++  PR KPPFPA  G++G
Sbjct: 160 AAGLLGKNILGSGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPAAVGVWG 219

Query: 205 CPTTVNNVESIAVVPTILRRGADWFAQFGR--PNNAGTKLFAISGHVNQPCVVEEAMSIS 262
            PT VNNVE++  VP I+  G DW+    R    + GTKL   SG V  P + E    ++
Sbjct: 220 KPTCVNNVETLCNVPAIIADGVDWYKSLAREGSEDMGTKLMGFSGKVKNPGLWELPFGVT 279

Query: 263 FEELIDKHCGGIRGGWDNLKAVIPGGSSVPCVRGENMRDAIMDFDYLRGELGSGLGTAAV 322
             EL + + GG+R G+  LKA  PGG+    +  E++ DA M    + G++G+ +GT   
Sbjct: 280 ARELFEDYAGGMRDGY-TLKAWQPGGAGTGFLLPEHL-DAQMYAGGI-GKVGTRMGTGLA 336

Query: 323 IVMDQSTDIIKAIWRLSAFYKHESCGQCTPCREGTGWMMRVMDRLVRGEAEVEEIDMLFD 382
           + +D + +++  +  +  F+  ESCG CTPCR+G  W ++++  L  GE    +I+ L  
Sbjct: 337 MAVDNTVNMVSLLRNMEQFFARESCGFCTPCRDGLPWSVKLLMALENGEGREGDIETLLG 396

Query: 383 VTKQV-EGHTICALGDAAAWPIQGLIRNFRDEIE 415
           +   +  G T CA    A  P+   I+ FR E E
Sbjct: 397 LVGFLGPGKTFCAHAPGAVEPLGSAIKYFRSEFE 430