Pairwise Alignments

Query, 433 a.a., NADH-quinone oxidoreductase, F subunit (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 453 a.a., NADH-quinone oxidoreductase subunit F from Pseudomonas putida KT2440

 Score =  333 bits (855), Expect = 5e-96
 Identities = 178/412 (43%), Positives = 245/412 (59%), Gaps = 10/412 (2%)

Query: 25  KRGHWDGTDKLIQMGRDDIVKIMKDSGLRGRGGAGFPTGLKWSFMPKESDGRPHYLVVNA 84
           K G+      L QM  DDIV+ +KDSGL+GRGGAGFPTG+KW  MPK+      YL+ NA
Sbjct: 40  KNGYAAARKALAQMSADDIVQSVKDSGLKGRGGAGFPTGVKWGLMPKDESMNIRYLLCNA 99

Query: 85  DESEPGTCKDREIMRHDPHTLIEGCLIASFAMGAHASYIYIRGEYIREREALQAAIDEAY 144
           DE EP T KDR +M   PH L+EG LI++ A+ A+  YI++RGEY    + L  AIDEA 
Sbjct: 100 DEMEPNTWKDRMLMEQQPHLLVEGMLISARALKAYRGYIFLRGEYTTAAKNLNRAIDEAK 159

Query: 145 EAGLLGKNAAGSGWDFDLYLTHGAGAYICGEETALIESLEGKKGMPRMKPPFPAGAGLYG 204
            AGLLGKN  GSG+DF+L++  GAG YICGEETALI SLEG++  PR KPPFPA  G++G
Sbjct: 160 AAGLLGKNILGSGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPAAVGVWG 219

Query: 205 CPTTVNNVESIAVVPTILRRGADWFAQFGRPNNA--GTKLFAISGHVNQPCVVEEAMSIS 262
            PT VNNVE++  VP I+  G DW+    R  +   GTKL   SG V  P + E    ++
Sbjct: 220 KPTCVNNVETLCNVPAIVANGNDWYKSLAREGSEDHGTKLMGFSGKVKNPGLWELPFGVT 279

Query: 263 FEELIDKHCGGIRGGWDNLKAVIPGGSSVPCVRGENMRDAIMDFDYLRG--ELGSGLGTA 320
             EL + + GG+R G+  LK   PGG+    +  E++ DA M   Y  G  ++G+ +GT 
Sbjct: 280 ARELFEDYAGGMRDGF-KLKCWQPGGAGTGFLLPEHL-DAQM---YAGGIAKVGTRMGTG 334

Query: 321 AVIVMDQSTDIIKAIWRLSAFYKHESCGQCTPCREGTGWMMRVMDRLVRGEAEVEEIDML 380
             + +D S +++  +  +  F+  ESCG CTPCR+G  W ++++  L  G+   E+I+ L
Sbjct: 335 LAMAVDDSINMVSLLRNMEEFFARESCGWCTPCRDGLPWSVKMLRALENGQGRAEDIETL 394

Query: 381 FDVTKQV-EGHTICALGDAAAWPIQGLIRNFRDEIEDRIKAQKTGRVTAALA 431
             +   +  G T CA    A  P+   I+ FR E E  +  +    +   LA
Sbjct: 395 LGLVNFLGPGRTFCAHAPGAVEPLGSAIKYFRSEFEAGVAPESAATLRPDLA 446