Pairwise Alignments

Query, 433 a.a., NADH-quinone oxidoreductase, F subunit (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 457 a.a., NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  420 bits (1079), Expect = e-122
 Identities = 207/393 (52%), Positives = 275/393 (69%), Gaps = 4/393 (1%)

Query: 31  GTDKLIQMGRDDIVKIMKDSGLRGRGGAGFPTGLKWSFMPKESDGRPHYLVVNADESEPG 90
           G   ++ M +D ++  +K+S LRGRGGAGFPTGLKWSFMP++  G+  YLV N+DE EPG
Sbjct: 64  GDPPVVGMTQDQVIATLKESALRGRGGAGFPTGLKWSFMPRQFPGQK-YLVCNSDEGEPG 122

Query: 91  TCKDREIMRHDPHTLIEGCLIASFAMGAHASYIYIRGEYIREREALQAAIDEAYEAGLLG 150
           TCKDR+I+ ++PH +IEG  IA++AMG    Y YI GE     E  +AA++EA  AG LG
Sbjct: 123 TCKDRDILLYNPHIVIEGMAIAAYAMGISVGYNYIHGEIFEAYERFEAALEEARAAGFLG 182

Query: 151 KNAAGSGWDFDLYLTHGAGAYICGEETALIESLEGKKGMPRMKPPFPAGAGLYGCPTTVN 210
               GSG++F L+  HG GAYICGEETAL+ESLEGKKG PR KPPFPA  GLYG PTT+N
Sbjct: 183 DGIMGSGFNFQLHAAHGFGAYICGEETALLESLEGKKGQPRFKPPFPASFGLYGKPTTIN 242

Query: 211 NVESIAVVPTILRRGADWFAQFGRPNNAGTKLFAISGHVNQPCVVEEAMSISFEELIDKH 270
           N E+ A VP I+R G   +   G+PNN GTK++++SG V  P   E  +   F +L++  
Sbjct: 243 NTETFAAVPWIIRNGGAAYLACGKPNNGGTKIYSVSGDVEMPGNYEVPLGTPFSKLLEL- 301

Query: 271 CGGIRGGWDNLKAVIPGGSSVPCVRGENMRDAIMDFDYLRGELGSGLGTAAVIVMDQSTD 330
            GG+R G   LKAVIPGGSS P +    M +  MD+D +  + GS LG+ AVIVMD S  
Sbjct: 302 AGGVRKG-RTLKAVIPGGSSAPVLPAHIMMECTMDYDSI-AKAGSMLGSGAVIVMDDSRC 359

Query: 331 IIKAIWRLSAFYKHESCGQCTPCREGTGWMMRVMDRLVRGEAEVEEIDMLFDVTKQVEGH 390
           +++++ RLS FY HESCGQCTPCREGTGW+ R++DR+ RGE +  ++ +L +V + + G 
Sbjct: 360 MVESLKRLSYFYMHESCGQCTPCREGTGWLWRMVDRIDRGEGKPADMALLDNVAENIMGR 419

Query: 391 TICALGDAAAWPIQGLIRNFRDEIEDRIKAQKT 423
           TICALGDAAA P++ +I++FR E E +I A +T
Sbjct: 420 TICALGDAAAMPVRAMIKHFRHEFEAKITAAQT 452