Pairwise Alignments

Query, 433 a.a., NADH-quinone oxidoreductase, F subunit (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 445 a.a., NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  343 bits (881), Expect = 5e-99
 Identities = 179/396 (45%), Positives = 247/396 (62%), Gaps = 4/396 (1%)

Query: 25  KRGHWDGTDKLIQMGRDDIVKIMKDSGLRGRGGAGFPTGLKWSFMPKESDGRPHYLVVNA 84
           K G+      L  +  D+IV  +KD+GL+GRGGAGF TGLKWS MPK+      YL+ NA
Sbjct: 32  KNGYEGARKALTGLSPDEIVSQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNA 91

Query: 85  DESEPGTCKDREIMRHDPHTLIEGCLIASFAMGAHASYIYIRGEYIREREALQAAIDEAY 144
           DE EPGT KDR +M   PH L+EG LI++FA+ A+  YI++RGEYI     L+ AI EA 
Sbjct: 92  DEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVHLRRAIAEAT 151

Query: 145 EAGLLGKNAAGSGWDFDLYLTHGAGAYICGEETALIESLEGKKGMPRMKPPFPAGAGLYG 204
           EAGLLGKN  G+G+DF+L++  GAG YICGEETALI SLEG++  PR KPPFPA +G++G
Sbjct: 152 EAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGVWG 211

Query: 205 CPTTVNNVESIAVVPTILRRGADWFAQFGRPNNAGTKLFAISGHVNQPCVVEEAMSISFE 264
            PT VNNVE++  VP IL  G +W+    +  +AGTKL   SG V  P + E     +  
Sbjct: 212 KPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAR 271

Query: 265 ELIDKHCGGIRGGWDNLKAVIPGGSSVPCVRGENMRDAIMDFDYLRGELGSGLGTAAVIV 324
           E+++ + GG+R G    KA  PGG+    +   ++ D  M+F+ + G+ GS LGTA  + 
Sbjct: 272 EILEDYAGGMRDGL-KFKAWQPGGAGTDFLTEAHL-DLPMEFESI-GKAGSRLGTALAMA 328

Query: 325 MDQSTDIIKAIWRLSAFYKHESCGQCTPCREGTGWMMRVMDRLVRGEAEVEEIDMLFDVT 384
           +D    ++  +  L  F+  ESCG CTPCR+G  W ++++  L RGE +  +I+ L  + 
Sbjct: 329 VDHEIGMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLC 388

Query: 385 KQV-EGHTICALGDAAAWPIQGLIRNFRDEIEDRIK 419
           + +  G T CA    A  P+Q  I+ FR+E E  IK
Sbjct: 389 RFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIK 424