Pairwise Alignments

Query, 202 a.a., OmpW family protein (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 228 a.a., outer membrane protein from Agrobacterium fabrum C58

 Score =  102 bits (254), Expect = 5e-27
 Identities = 75/227 (33%), Positives = 113/227 (49%), Gaps = 31/227 (13%)

Query: 2   KTHLLTTAAALVLTSAA-----------PALAQS---AGDWTF---GVGIINVNPDSDNG 44
           KT LL + AA+++ + A           P   Q+   A  W     G+G+I     +D+G
Sbjct: 7   KTALLASVAAMMMVNGALAADLAPLATAPTAEQAIAAASPWMLRVRGLGVIT----NDSG 62

Query: 45  SVVDGTLDVEVG-SDTQL-SLTAEYFFTDNIGLEILAATPFTHDIDVG--DGAVTGETKH 100
           SV DG     +  SDT +  L   YFFTDN   E++  T +      G   G   G+T  
Sbjct: 63  SV-DGLPGAGLSYSDTVIPELDISYFFTDNFAAELILGTTYAKINGEGVLAGTPVGKTWL 121

Query: 101 LPPTVSVNYHFTQFSGFKPYVGVGINYTNFF--EEKSSAGTLELDDSWGLAAQIGVDIPV 158
           LPPT+++ YHFT F  FKPY+G G+NY+ F+   EK     L++ +  G A Q+G D  +
Sbjct: 122 LPPTLTLQYHFTDFGAFKPYIGAGVNYSLFYNQSEKPGFSNLDVKNKLGAAVQVGFDYML 181

Query: 159 TERGALRLNARYIDIETD--AKLNGADI-GTVKIDPVVLNVAYVFTF 202
            E   +  + + I ++TD  A+L G  I G  K+DP ++     + F
Sbjct: 182 DEHWGVNFDVKKIFLKTDWTAELGGTPISGKAKLDPWLIGAGITYRF 228