Pairwise Alignments

Query, 383 a.a., 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 369 a.a., 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase from Pseudomonas simiae WCS417

 Score =  414 bits (1064), Expect = e-120
 Identities = 212/364 (58%), Positives = 268/364 (73%), Gaps = 2/364 (0%)

Query: 12  IYRRKSRQIHVGPVPIGGDAPIAVQTMTNTLTTDIPGTIAQVQAAADAGADIVRVSVPDV 71
           I RR SR+I VG VP+GGDAPIAVQ+MTN+ T D+  T+AQ+     AG DIVRVSVPD+
Sbjct: 7   IKRRVSRKIWVGSVPVGGDAPIAVQSMTNSDTNDVAATVAQINRLEAAGVDIVRVSVPDM 66

Query: 72  DSSRALKEIVRESPVPIVADIHFHYKRGIEAAEAGAACLRINPGNIGDEKRVKEVIKAAR 131
           D++ A   I +   VP+VADIHF YK  +  AE G  CLRINPGNIG E RV+ V+ AAR
Sbjct: 67  DAAEAFGRIKQLVKVPLVADIHFDYKIALRVAELGVDCLRINPGNIGREDRVRAVVDAAR 126

Query: 132 DNNCSMRIGVNAGSLEKHLLDKYAEPCPEAMVESALDHIKILQDNDFHEFKISCKASDVF 191
           D    +RIGVNAGSLEK L  KY EP P A+VESAL H++ L+  +F +FK+S KASDVF
Sbjct: 127 DRGIPIRIGVNAGSLEKDLQKKYGEPTPAALVESALRHVEHLERLNFQDFKVSVKASDVF 186

Query: 192 LSAAAYQALADATDAPLHLGITEAGGLMSGTIKSAIGLGNLLWMGIGDTIRVSLSADPVE 251
           ++  AY+ LA     PLHLGITEAGGL SGT+KSA+GLG LL  GIGDTIR+SL+ADPVE
Sbjct: 187 MAVEAYRLLAKEIVQPLHLGITEAGGLRSGTVKSAVGLGMLLAEGIGDTIRISLAADPVE 246

Query: 252 EIKVGYDILKSLGLRHRGVNVISCPSCARQGFDVIKTVEALEQRLEHIKTPMSLSIIGCV 311
           E+KVGYDILKSL LR RG+N I+CPSC+RQ FDV+KT+  LE RLE +  P+ +++IGCV
Sbjct: 247 EVKVGYDILKSLRLRSRGINFIACPSCSRQNFDVVKTMNDLELRLEDLLVPLDVAVIGCV 306

Query: 312 VNGPGEALMTDVGFTGGGAGSGMVYLAGKQSHKMSNEQMIDHIVEQVEKRAAELDAIEAA 371
           VNGPGEA    VG TGG     ++Y+ GK S K++N+ ++D + + + ++AAE  A +AA
Sbjct: 307 VNGPGEAKEAHVGLTGG--TPNLIYIDGKPSQKLTNDNLVDELEKLIREKAAEKVAADAA 364

Query: 372 EAAQ 375
             A+
Sbjct: 365 LIAR 368