Pairwise Alignments

Query, 176 a.a., Tetratricopeptide TPR_2 repeat protein (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 615 a.a., tetratricopeptide repeat protein from Paraburkholderia sabiae LMG 24235

 Score = 47.8 bits (112), Expect = 4e-10
 Identities = 32/93 (34%), Positives = 47/93 (50%)

Query: 37  VGNRLMQAGEYELALRAFFRAGAEQGMTAEILSGIGSANLKLGRLNQSETLLRRAVEEYP 96
           +GN    AG +E A+ AF ++   Q M A     +G+A   LGR  ++    RRA+E  P
Sbjct: 109 LGNAYALAGRHEDAVDAFEKSLRLQPMDASSHVNLGNALHALGRHREAVDSFRRALELRP 168

Query: 97  DYVPGWNNLGVLLMEKGDYGEASRVFRQAFALD 129
            +    NN+G+ L   G   EAS  FR A  ++
Sbjct: 169 GHAGAHNNIGMALNALGSATEASAHFRAALKIE 201



 Score = 43.5 bits (101), Expect = 7e-09
 Identities = 29/92 (31%), Positives = 41/92 (44%)

Query: 37  VGNRLMQAGEYELALRAFFRAGAEQGMTAEILSGIGSANLKLGRLNQSETLLRRAVEEYP 96
           + N L   G++E A+  F    A Q      L G+G+A   LGR  ++     RAV   P
Sbjct: 211 LANTLDATGQHEQAVAEFEAVLAMQANLPPALFGLGNALASLGRHEEARPRFERAVGLDP 270

Query: 97  DYVPGWNNLGVLLMEKGDYGEASRVFRQAFAL 128
           ++   W +LG      G +  A R F QA  L
Sbjct: 271 NFALAWLSLGAAHHALGAHAAAVRAFDQALRL 302



 Score = 35.0 bits (79), Expect = 2e-06
 Identities = 35/127 (27%), Positives = 57/127 (44%), Gaps = 4/127 (3%)

Query: 28  DGAAVDGV-LVGNRLMQAGEYELALRAFFRAGAEQGMTAEILSGIGSANLKLGRLNQSET 86
           D A VD + L+G    Q G++E A     RA   +   A +   +G+A   LGRL+Q+  
Sbjct: 31  DPAHVDALHLLGVLRHQQGQHEEAADLVRRAADLRPQDAGLQLNLGNALKALGRLDQAIE 90

Query: 87  LLRRAVEEYPDYVPGWNNLGVLLMEKGDYGEASRVFRQAFAL---DSGNSDDIRNNLSLA 143
             R A+   P +     NLG      G + +A   F ++  L   D+ +  ++ N L   
Sbjct: 91  RFRNALTLAPTFPMAHYNLGNAYALAGRHEDAVDAFEKSLRLQPMDASSHVNLGNALHAL 150

Query: 144 LEKRDAL 150
              R+A+
Sbjct: 151 GRHREAV 157



 Score = 31.2 bits (69), Expect = 4e-05
 Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 14/105 (13%)

Query: 79  GRLNQSETLLRRAVEEYPDYVPGWNNLGVLLMEKGDYGEASRVFRQA---------FALD 129
           GRL+ +E   R  ++  P +V   + LGVL  ++G + EA+ + R+A           L+
Sbjct: 15  GRLDDAERGYRATLDLDPAHVDALHLLGVLRHQQGQHEEAADLVRRAADLRPQDAGLQLN 74

Query: 130 SGNSDDIRNNLSLALEK-RDALRYSQPSENKEFDLVWQGNGSYAL 173
            GN+      L  A+E+ R+AL  +       ++L   GN +YAL
Sbjct: 75  LGNALKALGRLDQAIERFRNALTLAPTFPMAHYNL---GN-AYAL 115



 Score = 30.4 bits (67), Expect = 6e-05
 Identities = 28/108 (25%), Positives = 43/108 (39%), Gaps = 1/108 (0%)

Query: 37  VGNRLMQAGEYELALRAFFRAGAEQGMTAEILSGIGSANLKLGRLNQSETLLRRAVEEYP 96
           +GN L   G  + A+  F  A             +G+A    GR   +     +++   P
Sbjct: 75  LGNALKALGRLDQAIERFRNALTLAPTFPMAHYNLGNAYALAGRHEDAVDAFEKSLRLQP 134

Query: 97  DYVPGWNNLGVLLMEKGDYGEASRVFRQAFALDSGNSDDIRNNLSLAL 144
                  NLG  L   G + EA   FR+A  L  G++    NN+ +AL
Sbjct: 135 MDASSHVNLGNALHALGRHREAVDSFRRALELRPGHA-GAHNNIGMAL 181



 Score = 29.3 bits (64), Expect = 1e-04
 Identities = 25/80 (31%), Positives = 36/80 (45%), Gaps = 2/80 (2%)

Query: 37  VGNRLMQAGEYELALRAFFRA-GAEQGMTAEILSGIGSANLKLGRLNQSETLLRRAVEEY 95
           +GN L   G +E A   F RA G +       LS +G+A+  LG    +     +A+   
Sbjct: 245 LGNALASLGRHEEARPRFERAVGLDPNFALAWLS-LGAAHHALGAHAAAVRAFDQALRLR 303

Query: 96  PDYVPGWNNLGVLLMEKGDY 115
           PD      N GV L+  GD+
Sbjct: 304 PDLPMAHMNRGVTLLTLGDF 323