Pairwise Alignments

Query, 807 a.a., DNA damage response helicase, ligase-associated (from data) from Dinoroseobacter shibae DFL-12

Subject, 1538 a.a., ATP-dependent helicase from Escherichia coli ECRC98

 Score =  253 bits (646), Expect = 6e-71
 Identities = 249/872 (28%), Positives = 367/872 (42%), Gaps = 106/872 (12%)

Query: 5   PPPSLPNEITRWIAAQGWALHPHQREMLARSQD-------PALLLIAPTGGGKTLAGFLP 57
           P PS P       A + W L   ++    +SQ           L+IAPTG GKTLA FL 
Sbjct: 5   PNPSSPLPDVFSPATRDWFLRAFKQPTAVQSQTWHVAARGEHALVIAPTGSGKTLAAFLY 64

Query: 58  TLAEL---GPAPPPGLHT------LYISPLKALAADIKRNLRRPIE----------EAGL 98
            L  L   G       H       LYISP+KAL  D++RNL+ P++          E  +
Sbjct: 65  ALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEV 124

Query: 99  AIRVEDRTGDTSQTQRKRQRADPPHILLTTPESLALMLSYEDAARTFAGVQRVIVDEIHA 158
            +RV  RTGDT   +R +   +PP IL+TTPESL LML+   A  T  GV+ VI+DE+HA
Sbjct: 125 NLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLT-SRARETLRGVETVIIDEVHA 183

Query: 159 LAESKRGDQLMLGLARLQSLV-PGLRRVGLSATVEDPPAIARFLARHPDPCDILLADPGP 217
           +A SKRG  L L L RL +L+    +R+GLSATV     +A FL     P  ++      
Sbjct: 184 VAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLG-GDRPVTVVNPPAMR 242

Query: 218 APDITML----QTDEAPPWSGGGGR------------YAIPAILQAVKAHKTTLIFHNTR 261
            P I ++      D+    + G G             Y    IL  V  H++T++F N+R
Sbjct: 243 HPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSR 302

Query: 262 AQAELF---FHALWLA---------------------------NEDALPIGIHHGSLSRE 291
             AE      + L+ A                           + D      HHGS+S+E
Sbjct: 303 GLAEKLTARLNELYAARLQRSPSIAADAAHFESTSGATSNRVQSSDVFIARSHHGSVSKE 362

Query: 292 QRQRVEAAMAEGALRAIVCTGSLDLGIDWGDVDLVIQVGAPKNVKRLVQRIGRANHRYNA 351
           QR   E A+  G LR +V T SL+LGID G V+LVIQV  P +V   +QRIGRA H+   
Sbjct: 363 QRAITEQALKSGELRCVVATSSLELGIDMGAVELVIQVATPLSVASGLQRIGRAGHQIGG 422

Query: 352 PSKALLVPANRFEVVECHAALKTMADGKLDGEPRAEGPRDVLCQHILAVAAAGPFDADAL 411
            SK L  P  R ++V+    ++ M  G+L+       P DVL QH +A AA      D  
Sbjct: 423 ISKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQHTVAAAAMDALQVDEW 482

Query: 412 FAEVTSAGAYRDLTRPAFDDCLEFCATGGYALRAYDRWQRLL--HRPDGMWQLRDPRAAR 469
           ++ V  A  ++DL R  FD  L+   +G Y    +  ++  L  +R  G+   R P A  
Sbjct: 483 YSRVRRAAPWKDLPRRVFDATLDM-LSGRYPSGDFSAFRPKLVWNRETGILTAR-PGAQL 540

Query: 470 QIRMNIGTIIDTETLKVRL---KNRRGGTPLGEVEEGFAATLTPGDTFLIGGQIVRYEGL 526
               + GTI D     V L   + + G   +GE++E         D   +G    R + +
Sbjct: 541 LAVTSGGTIPDRGMYSVLLPEGEEQAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQI 600

Query: 527 NELTVEVTRRADKQPKIATFMGTKFATSTQLSHTILEMFR-QPDWPELPSATCEWLHLQR 585
               V VT    +  ++  + G       +L   I +      D          WL  + 
Sbjct: 601 TRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEEN 660

Query: 586 KVSKL--------------PEADRMLMETFGHEDRQY-LVCYGFAGRNAQQTLGLLLSQR 630
            ++ +              P +  +++E    E   + ++ +   GR   +   L ++ R
Sbjct: 661 TIANIQGLIDEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWALAIAGR 720

Query: 631 MELAGLAPIGFVATD--YATMLWGLEEVRDPAA--LVRPDGLRDSFEQWLSGNAVMKRTF 686
           +     A    VA+D      +   +     AA  L  P+ L     + +  +A+    F
Sbjct: 721 IHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARF 780

Query: 687 RAAAIIAGLIDRNTPGRRKTGRQATFSSDILYDTLLKYDPDHVLMQITREEARRGLVDFG 746
           R  A  A L+   TPG R    Q    +  L +    Y PD   +  T  E  + + D  
Sbjct: 781 RECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGY-PDFPAILETLRECLQDVYDLP 839

Query: 747 RIEELLARTTG---RVDHRRLDRISPLAAPLL 775
            +E L+ R  G   ++        SP A  LL
Sbjct: 840 ALERLMRRLNGGEIQISDVTTTTPSPFATSLL 871