Pairwise Alignments

Query, 269 a.a., Integrase catalytic region (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 281 a.a., IS3 family transposase from Magnetospirillum magneticum AMB-1

 Score = 76.3 bits (186), Expect = 7e-19
 Identities = 67/249 (26%), Positives = 114/249 (45%), Gaps = 10/249 (4%)

Query: 16  CKALAVDRSSVRYRSVRPDDA--EARAAMKAVAAERRRFGYRRIHVMLERQGIMMNLKKL 73
           C  L++ RSS  Y  +   +A  E    +     E   +G R++   L+ +G  +N+K++
Sbjct: 15  CHLLSIARSSFYYEPLGETEANLELMRLIDRQFLETPFYGVRQMAWHLQNEGHPVNVKRV 74

Query: 74  RRLYREEKLQ--VRRRGGRKRALGTR-WPMLVP----DAPNQHWSLDFVSDALTDGRRFR 126
           RRL R   L    ++    K A G + +P L+     D PNQ W  D     +  G  + 
Sbjct: 75  RRLMRLMGLMPIYQKPNTSKPAKGHKTYPYLLRGLRIDRPNQVWCADITYLPMRRGFLY- 133

Query: 127 VLAVVDDYSRECLALVADTSLSGLRVVRELDALMLRRGQPAMVVSDNGTELTSVAVLSWC 186
           ++A++D  +R+ LA     +L     V  L+  +LR G P ++ +D G++ TS A +   
Sbjct: 134 LIAIMDWATRKVLAWRISNTLEADFCVEVLNEAILRFGPPEIMNTDQGSQFTSFAWIDRL 193

Query: 187 QRTGIEWHYIAPGKPMQNGFVESFNGRFRDELLNESLFSSLADAREQIRAWQHDYNHHRP 246
           ++ G        G+ + N F+E      + E +    + + + AR  I  W   YNH RP
Sbjct: 194 KQAGTRISMDGKGRCIDNVFIERLWRSLKYECVYLHAWETGSQARAGIGPWITFYNHKRP 253

Query: 247 HSGLGNIPP 255
           H+  G   P
Sbjct: 254 HAAHGGRTP 262