Pairwise Alignments

Query, 396 a.a., efflux transporter, RND family, MFP subunit (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 360 a.a., RND family efflux transporter, MFP subunit from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 87.8 bits (216), Expect = 4e-22
 Identities = 88/353 (24%), Positives = 151/353 (42%), Gaps = 38/353 (10%)

Query: 20  PTVPPLFAQERPAAVVTETVE--ERALAETLPVFGQVVASRDSAVASRTAGIVDEVAVLV 77
           P+  P    E   A+  + VE     L   L V G V+++   ++ +   G+V+ +    
Sbjct: 35  PSKSPQSTPEAMTALPVDVVEVTPERLENNLNVTGNVLSNESVSLRAEITGLVESINFEE 94

Query: 78  GDRVAEGATLAVL-DTELAQIELEQALADIAEARAGIAVAEAQLGRAEDARDRVEGLRNT 136
           G  V +G  L  L D EL                       AQL R E  +   EG  + 
Sbjct: 95  GQFVKKGTPLVYLNDDELT----------------------AQLDRLEYTKKLYEGQESR 132

Query: 137 ASFSSARFDDAMSDLAAATGELNQARARLLNAEAAEQRARYTLDRARITAPFAGVVLSVA 196
                AR   +  +       LNQ    L + +  + +    LD+  I APF GV+    
Sbjct: 133 QKQLLAREAISQEEYDII---LNQYNTTLSDIKLVKAQ----LDKTVIKAPFDGVLGLRQ 185

Query: 197 ADPGQFISVGDPIARIIDINALEIEAQVPSQFAPAIPPGVTVKGVSEAGQQLDL-QIRAI 255
              G  IS  D IA I++I+ ++IE  +P ++A  +  G T++  + A   L   ++ A 
Sbjct: 186 ISAGSVISTTDIIANIVNIDPIKIEFSIPERYASQVQVGSTIEFSNNASHGLKKGKVYAY 245

Query: 256 LPTESVSTRTRPVR-LSGDLDALGATLAVGQSITLQVPVSAPRAALAVPKDALVQGAQGW 314
            P    +TRT  +R +S + D        G  + ++  +     AL VP  +L+    G+
Sbjct: 246 EPVIDANTRTLTLRAISPNED---RKFLPGMFVNIRFNLEVEEDALLVPSQSLIPELNGY 302

Query: 315 TVF-VDADGIAEPRPVRIGVAMGDRFEVLSGLAEGDAVVVRGNERLRPGQALQ 366
            +F V+ +GI + R V+IG+      ++L GL+ G+ V+  G  + + G  ++
Sbjct: 303 KLFLVNQEGIVQERQVQIGIRTDSEVQILDGLSPGEMVLTTGVLQAKEGMKVK 355