Pairwise Alignments

Query, 527 a.a., extracellular solute-binding protein family 5 (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 521 a.a., oligopeptide ABC transporter substrate-binding protein from Agrobacterium fabrum C58

 Score =  295 bits (754), Expect = 4e-84
 Identities = 176/517 (34%), Positives = 261/517 (50%), Gaps = 10/517 (1%)

Query: 5   TLLLATSALVLTPILASAETLRWARAGDSLTLDPHAQNEGPTHTLAHQIYEPLIIRDHFG 64
           + +LA  A     + A AETLRW    D  +LDP++          + IYE L+      
Sbjct: 6   SFVLAAMAAAAIAVPAHAETLRWGGRADLYSLDPYSVPSTSNLAFLNHIYEGLVRYGPDF 65

Query: 65  QFQGALATEWAPKPDDPSVWVFKLREGVTFHDGSAFTAEDVVFSFERAKSETSAMKELLT 124
           Q + ALATEW  K  D   W F LR+GV FHDGS FTA+DVV SF RA   TS ++  + 
Sbjct: 66  QIEPALATEW--KLIDGKAWRFTLRKGVKFHDGSDFTADDVVASFTRASDATSPLRGNIP 123

Query: 125 SISEVRAVDDMTVEFVTEGPNPILPNNFTNLFIMDKGWTEANGVTRVQDIANGETTFAAT 184
             + V+ VDD TV+     P  +  N+ TN+FI +  W + N   +  D A+    +   
Sbjct: 124 VFAGVKKVDDYTVDLEVSAPTSLFLNDITNIFIFNAKWLKDNNSEKPTDFASKVDGYTTM 183

Query: 185 NAMGTGPYVLTSREPDVRTVLTINPDYWGADDFPLQVTEIIYTPIQNAATRVAALLSGEV 244
           +  GTGP+ L SR PD +TVL  N  +W  D     +  I + PI +AATRVAALLSGE+
Sbjct: 184 HTNGTGPFKLESRVPDSKTVLVANEGWW--DQKKHNLDRIEFVPIASAATRVAALLSGEI 241

Query: 245 DFIQDVPVQDLERVAGTDGLEVQTAAQNRVIFLGMNSGADDLDSDNVEGANPLADARVRK 304
           D I   P+QDL R+  +  + V+   + R +F+G N      D       NP  D RVR+
Sbjct: 242 DLIDSAPIQDLPRLESSPNISVKKRTELRTLFIGFNRREKLEDGK----PNPFNDLRVRQ 297

Query: 305 AMNMAINRDAIKQVVMRGQSAPAGMIAPPFVNGWTAEMDGAAMTDIDAAKALMEEAGYGD 364
           A   +I+RD I + VMRG + P+G +  P + G+   +D     D   A+ L+ +AG   
Sbjct: 298 AFEASIDRDLINKKVMRGLARPSGSLIAPEIAGYAKSLDTFEPADPAKAQKLLADAGM-K 356

Query: 365 GFSIQLDCPNDRYINDEAICQAVVGMLGQIGVTVNLDAKPKAQHFPLIQNGETNFYMLGW 424
             +    C ND  +N+E IC  V  ML + G    +D  P++   P    G+ + + L W
Sbjct: 357 NLAFTYTCMNDESVNEEDICSGVANMLKRGGFQPTIDIAPRSVQSPKRNGGKADVFNLSW 416

Query: 425 -GVPTYDSEYVFNFLVHTREGDRGSWNNTGFSNAEVDAKIVSLASETDLAVRNQTIAEIW 483
              PT D+  + + ++ TR+G  G  N  G+SN E+D  +   A E D   R        
Sbjct: 417 ANEPTLDAFSMLSQILSTRKGAMGVSNYGGWSNPEIDKLVAQAAQEQDNTKRLALEEAAL 476

Query: 484 QVVQDEQLYLPIHHQVLNWGNTSAVGYPNVSPEDDPK 520
           ++ +DE + +P+H Q + W   + V   +   ++ P+
Sbjct: 477 KIAKDETMLVPLHQQPIAWAMLAKVKSVDFRADNKPR 513