Pairwise Alignments

Query, 527 a.a., extracellular solute-binding protein family 5 (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 511 a.a., oligopeptide ABC transporter substrate-binding protein from Agrobacterium fabrum C58

 Score =  132 bits (332), Expect = 3e-35
 Identities = 138/531 (25%), Positives = 229/531 (43%), Gaps = 60/531 (11%)

Query: 10  TSALVLTPILASAETLRWARAGDSLTL----DPHAQNEGPTH-----TLAHQIYEPLIIR 60
           T+  V   + A+A T   A A   +T+    DP + +   T       +A  I++ L  R
Sbjct: 9   TTTFVALAMAATAFTAAPAFAAGKMTISSPQDPGSWDPIDTFLVQWAAVATNIFDGLTYR 68

Query: 61  DHFGQFQGALATEWAPKPDDPSVWVFKLREGVTFHDGSAFTAEDVVFSFERAKSETSA-- 118
               +    LA  W    +   +  FKLR+ V FH+G  F A  V F+FER   E  A  
Sbjct: 69  GPDLKLAPGLAESWEELDEGKRIR-FKLRQNVKFHNGEPFNAAAVKFTFERLLGEQGAKG 127

Query: 119 -MKELLTSISEVRAVDDMTVEFVTEGPNPILPNNFTNL--FIMDKGWTEANGVTRVQDIA 175
             +    +I  V  +DD TV+   + P+P+L          I+   + +  G    +D  
Sbjct: 128 PQRSNYVAIESVDVIDDYTVDMKLKAPDPVLLTKLAGYGGMIVPPAYIKEKG----EDNF 183

Query: 176 NGETTFAATNAMGTGPYVLTSREPDVRTVLTINPDYWGADDFPLQVTEIIYTPIQNAATR 235
           N        N +GTG +   S  P     L  NPDYWG      +++E+ Y  I   +T 
Sbjct: 184 N-------LNPVGTGAFKFVSYAPKNNIKLEANPDYWGGAP---KLSELEYRFIAEPSTA 233

Query: 236 VAALLSGEVDFI--QDVPVQDLERVAGTDGLEVQTAAQNRVIFLGMNSGADDLDSDNVEG 293
           VA L +G VD +    +P+  +  + G   L++ +     V  L  N+       D +  
Sbjct: 234 VAELQAGRVDLVIPPTIPIGMIPVIEGDSKLQIVSVPGPTVDALRFNT------RDGI-- 285

Query: 294 ANPLADARVRKAMNMAINRDAIKQVVMRGQSAPAGMIAPPFVNGWTAEMDGAAMTDIDAA 353
               AD +VRKA+ MA++R  I + ++ GQ++           G+  E+      D D A
Sbjct: 286 ---TADPKVRKAIIMAVDRGTIVKSILAGQASEIASFQSALSFGYDPELKPLPY-DPDGA 341

Query: 354 KALMEEAGYGDGFSIQLDC-PNDRYINDEAICQAVVGMLGQIGVTVNLDAKPKAQHF--- 409
           K L+ EAG   G ++Q+D   ND  +N+  + Q +   L  +G+T  +  KP   +    
Sbjct: 342 KKLLAEAGVKPGAALQIDIRGNDATMNE--VAQVISSYLSMVGITATI--KPYETNVLLN 397

Query: 410 PLIQNGETN-FYMLGWGVPTYDSEYVFNFLVHTREGDRGSWNNTGFSNAEVDAKIVSLAS 468
            +I  G+T   +   WG  T+D +     + H+ E     WN     + ++D  + S   
Sbjct: 398 DIIPQGKTGAMFQQKWGGWTFDYDNTAYSMYHSGE----KWNPYD-KDEKLDKLLESQRP 452

Query: 469 ETDLAVRNQTIAEIWQVVQDEQLYLPIHHQVLNWG-NTSAVGYPNVSPEDD 518
            TD A R + + E+     +  L +P+++    +G N    G+  V+P D+
Sbjct: 453 LTDRAEREKILKELGSYTAERALEIPLYNTNAIYGINKRVKGF--VAPPDN 501